RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ITM2CQ9NQX7 267 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 GALNT8Q9NY28 637 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SEC14L3Q9UDX4 400 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 ICKQ9UPZ9 632 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 KCNE3Q9Y6H6 103 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SLC9B1P1A6NJY1 282 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 RDH16O75452 317 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 PRPS2P11908 318 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 CPMP14384 443 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SHMT2P34897 504 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 MAP2K4P45985 399 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 CCT3P49368 545 aaKnown RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 HHEXQ03014 270 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 CYBRD1Q53TN4 286 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 OGFRL1Q5TC84 451 aaPredicted RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 GRHL2Q6ISB3 625 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 TRIM40Q6P9F5 258 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 EID3Q8N140 333 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 TCAIMQ8N3R3 496 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 ZNF548Q8NEK5 533 aaPredicted RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 PEX11GQ96HA9 241 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SLC38A3Q99624 504 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 EFCAB11Q9BUY7 163 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 C1QTNF7Q9BXJ2 289 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 RAD21L1Q9H4I0 556 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 REEP4Q9H6H4 257 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 PREBQ9HCU5 417 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SERHLQ9NQF3 203 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 TAS2R16Q9NYV7 291 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 DHCR7Q9UBM7 475 aaKnown RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 DNAJC13O75165 2243 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 CFAP47Q6ZTR5 3102 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 CPN2P22792 545 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 AKT2P31751 481 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 OR1D4P47884 311 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 GFERP55789 205 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 CLDN6P56747 220 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 CSNK1G2P78368 415 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SLC13A2Q13183 592 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SMAD2Q15796 467 aaKnown RBP9.78□□□□□ -0.84
RFFL-212ENST00000584655 PRMT9Q6P2P2 845 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 ZNF793Q6ZN11 406 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SHFQ7M4L6 423 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 ADGRF3Q8IZF5 1079 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 HORMAD2Q8N7B1 307 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 OR2A1Q8NGT9 310 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 WDR20Q8TBZ3 569 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 UCKL1Q9NWZ5 548 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 SLC6A14Q9UN76 642 aa9.78□□□□□ -0.84
RFFL-212ENST00000584655 QSOX1O00391 747 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 PDPK1O15530 556 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 VEGFDO43915 354 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 LILRB5O75023 590 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 HNRNPA2B1P22626 353 aaKnown RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 TPP2P29144 1249 aaPredicted RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 CDK6Q00534 326 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 DUSP2Q05923 314 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 BNIP2Q12982 314 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 MPEG1Q2M385 716 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 VMACQ2NL98 169 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 LIPJQ5W064 366 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 TRIM46Q7Z4K8 759 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ACOT4Q8N9L9 421 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 SMRP1Q8NCR6 262 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ZNF555Q8NEP9 628 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 FAM174AQ8TBP5 190 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ELSPBP1Q96BH3 223 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 KLHDC7BQ96G42 594 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 CSF3RQ99062 836 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 UGT2B28Q9BY64 529 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 SMPD3Q9NY59 655 aaPredicted RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 MAGEL2Q9UJ55 1249 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ENTPD4Q9Y227 616 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 LOC100506127A0A0U1RQW1 187 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 CPSF4LA6NMK7 179 aaKnown RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 CTSVO60911 334 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 GKN3PP0CG01 181 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 IGFBP5P24593 272 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 PHEXP78562 749 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 SRSF11Q05519 484 aaKnown RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 DMWDQ09019 674 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 DYNC1I2Q13409 638 aaKnown RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 PRR23BQ6ZRT6 265 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 LPCAT2Q7L5N7 544 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 C6orf120Q7Z4R8 191 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 VN1R5Q7Z5H4 357 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 IQCHQ86VS3 1027 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 TMEM151BQ8IW70 566 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 OR56A3Q8NH54 315 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 FAM81AQ8TBF8 368 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 S1PR5Q9H228 398 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 RETREG1Q9H6L5 497 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 EXOSC4Q9NPD3 245 aaKnown RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 TMEM184CQ9NVA4 438 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 MAT2BQ9NZL9 334 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 TAAR2Q9P1P5 351 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 ATXN7L1Q9ULK2 861 aaPredicted RBP9.77□□□□□ -0.85
RFFL-212ENST00000584655 SLC9A8Q9Y2E8 581 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 MYRFQ9Y2G1 1151 aa9.77□□□□□ -0.85
RFFL-212ENST00000584655 PPIL1Q9Y3C6 166 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms