RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 A0A1W2PQ45 241 aaPredicted RBP12.56□□□□□ -0.4
RNF43-208ENST00000584437 A0A1W2PQY0 241 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 KCTD18Q6PI47 426 aaPredicted RBP12.56□□□□□ -0.4
RNF43-208ENST00000584437 FAM198BQ6UWH4 519 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 TMEM135Q86UB9 458 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 DCUN1D3Q8IWE4 304 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 MTMR14Q8NCE2 650 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 DEDD2Q8WXF8 326 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 FCRL3Q96P31 734 aaPredicted RBP12.56□□□□□ -0.4
RNF43-208ENST00000584437 ACTL8Q9H568 366 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 ABI3Q9P2A4 366 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 OARD1Q9Y530 152 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 SMAD9O15198 467 aaKnown RBP12.56□□□□□ -0.4
RNF43-208ENST00000584437 SLC31A1O15431 190 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 AHSA1O95433 338 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 S1PR1P21453 382 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 ACTR1BP42025 376 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 FRKP42685 505 aaPredicted RBP12.56□□□□□ -0.4
RNF43-208ENST00000584437 FLT3LGP49771 235 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 OR4D2P58180 307 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 ACTR1AP61163 376 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 GALNT1Q10472 559 aaPredicted RBP12.56□□□□□ -0.4
RNF43-208ENST00000584437 GATA6Q92908 595 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 NECAB3Q96P71 396 aaPredicted RBP12.56□□□□□ -0.4
RNF43-208ENST00000584437 TAS2R8Q9NYW2 309 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 ASB4Q9Y574 426 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 A0A1B0GVT2 93 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 UPK3BL1B0FP48 263 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 UPK3BL2E5RIL1 263 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 MTX2O75431 263 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 GDI2P50395 445 aaKnown RBP12.56□□□□□ -0.4
RNF43-208ENST00000584437 CDK10Q15131 360 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 UAP1L1Q3KQV9 507 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 SLC35F1Q5T1Q4 408 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 AADACL4Q5VUY2 407 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 TLDC1Q6P9B6 456 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 ZNF550Q7Z398 422 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 BEST3Q8N1M1 668 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 MS4A15Q8N5U1 240 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 OR4K1Q8NGD4 311 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 PCDH10Q9P2E7 1040 aa12.56□□□□□ -0.4
RNF43-208ENST00000584437 TCHHQ07283 1943 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 CCND3P30281 292 aaPredicted RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 CLCNKAP51800 687 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 ACTA2P62736 377 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 ACTG2P63267 376 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 SLC36A3Q495N2 470 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 CCDC58Q4VC31 144 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 MS4A13Q5J8X5 152 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 CHDHQ8NE62 594 aaPredicted RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 LMO3Q8TAP4 145 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 PNPLA2Q96AD5 504 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 BORCS6Q96GS4 357 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 ZNF486Q96H40 463 aaPredicted RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 LHPPQ9H008 270 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 KATNBL1Q9H079 304 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 TMEM45AQ9NWC5 275 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 ZDHHC7Q9NXF8 308 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 LIPT1Q9Y234 373 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 MYOM1P52179 1685 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 SPEF2Q9C093 1822 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 SLC22A31A6NKX4 558 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 H3BMQ9 156 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 H7C417 338 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 CREB5Q02930 508 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 DUS1LQ6P1R4 473 aaKnown RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 PRSS55Q6UWB4 352 aaPredicted RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 SLC29A4Q7RTT9 530 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 TMEM151AQ8N4L1 468 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 OR56A3Q8NH54 315 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 CHFRQ96EP1 664 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 COG8Q96MW5 612 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 ORAI3Q9BRQ5 295 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 SEC61A2Q9H9S3 476 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 TMEM14AQ9Y6G1 99 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 BLOC1S5-TXNDC5H3BN57 136 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 GP1BBP13224 206 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 HNRNPFP52597 415 aaKnown RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 NCS1P62166 190 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 SP2Q02086 613 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 NIPAL4Q0D2K0 466 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 RCAN2Q14206 197 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 GNMTQ14749 295 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 PCBP2Q15366 365 aaKnown RBP eCLIP12.55□□□□□ -0.46e-7■■■□□ 15.4
RNF43-208ENST00000584437 ALKBH2Q6NS38 261 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 RGMBQ6NW40 437 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 ANKRD54Q6NXT1 300 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 COMMD7Q86VX2 200 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 DCAF4L2Q8NA75 395 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 C1orf74Q96LT6 269 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 JSRP1Q96MG2 331 aaPredicted RBP12.55□□□□□ -0.4
RNF43-208ENST00000584437 RAD9AQ99638 391 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 TXLNGYQ9BZA5 131 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 RETREG1Q9H6L5 497 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 MEN1O00255 615 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 UPK1BO75841 260 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 TOXO94900 526 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 C8AP07357 584 aa12.55□□□□□ -0.4
RNF43-208ENST00000584437 LRRC37A5PQ49AS3 106 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms