RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZKSCAN8Q15776 578 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-206ENST00000584112 PDK4Q16654 411 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 HIST2H2ACQ16777 129 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-206ENST00000584112 C18orf21Q32NC0 220 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-206ENST00000584112 PAGE2BQ5JRK9 111 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 CES4AQ5XG92 561 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 HIST2H2AA3Q6FI13 130 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 TRIM40Q6P9F5 258 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 TBC1D1Q86TI0 1168 aaPredicted RBP10.39□□□□□ -0.75
CCDC47-206ENST00000584112 CTAGE6Q86UF2 777 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 CCDC25Q86WR0 208 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 RPS19BP1Q86WX3 136 aaKnown RBP10.39□□□□□ -0.75
CCDC47-206ENST00000584112 SPATA6LQ8N4H0 392 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 AMER2Q8N7J2 671 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 SNX31Q8N9S9 440 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 PDPRQ8NCN5 879 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 OR2L5Q8NG80 312 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 KIAA1191Q96A73 305 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 MS4A6EQ96DS6 147 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 PTCD3Q96EY7 689 aaKnown RBP10.39□□□□□ -0.75
CCDC47-206ENST00000584112 SCMH1Q96GD3 660 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 UBXN10Q96LJ8 280 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 SIGLEC12Q96PQ1 595 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 NPAS2Q99743 824 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 TMEM79Q9BSE2 394 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 EFCAB11Q9BUY7 163 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 CDCP1Q9H5V8 836 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 KLHL1Q9NR64 748 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 LRFN1Q9P244 771 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 RNF112Q9ULX5 631 aa10.39□□□□□ -0.75
CCDC47-206ENST00000584112 FCHO1O14526 889 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 PHF1O43189 567 aaPredicted RBP10.38□□□□□ -0.75
CCDC47-206ENST00000584112 WISP2O76076 250 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 MST1P26927 711 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 CRABP2P29373 138 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 HNRNPH1P31943 449 aaKnown RBP10.38□□□□□ -0.75
CCDC47-206ENST00000584112 MAGEA4P43358 317 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 CASP6P55212 293 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 HSD17B7P56937 341 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 RAB38P57729 211 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 GPX6P59796 221 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 PMP22Q01453 160 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 CKAP4Q07065 602 aaKnown RBP10.38□□□□□ -0.75
CCDC47-206ENST00000584112 MYBPHQ13203 477 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 SLMAPQ14BN4 828 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 OR4D1Q15615 310 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 ADPRMQ3LIE5 342 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 KBTBD12Q3ZCT8 623 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 XKR6Q5GH73 641 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 SPINK14Q6IE38 97 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 SYT10Q6XYQ8 523 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 RAPH1Q70E73 1250 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 LRRC70Q7Z2Q7 622 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 CCDC91Q7Z6B0 441 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 ZNF595Q8IYB9 648 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 KIF2BQ8N4N8 673 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 PPM1NQ8N819 430 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 STAG3L4Q8TBR4 150 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 FBXO25Q8TCJ0 367 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 UBE2E3Q969T4 207 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 MBD6Q96DN6 1003 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 WDR34Q96EX3 536 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 SERINC2Q96SA4 455 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 POLDIP3Q9BY77 421 aaKnown RBP10.38□□□□□ -0.75
CCDC47-206ENST00000584112 DEFB126Q9BYW3 111 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 PLA2G12AQ9BZM1 189 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 REXO4Q9GZR2 422 aaKnown RBP10.38□□□□□ -0.75
CCDC47-206ENST00000584112 AICDAQ9GZX7 198 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 COPS7BQ9H9Q2 264 aaPredicted RBP10.38□□□□□ -0.75
CCDC47-206ENST00000584112 NMRAL1Q9HBL8 299 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 NECTIN3Q9NQS3 549 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 PRTFDC1Q9NRG1 225 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 ANKRD10Q9NXR5 420 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 NUDT4Q9NZJ9 180 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 PTBP2Q9UKA9 531 aaKnown RBP10.38□□□□□ -0.75
CCDC47-206ENST00000584112 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
CCDC47-206ENST00000584112 NINQ8N4C6 2090 aa10.38□□□□□ -0.75
CCDC47-206ENST00000584112 A0A0G2JN53 185 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 ASPDHA6ND91 283 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 A8MUA0 341 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 FAM227AF5H4B4 570 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 MAN1A2O60476 641 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 CCNT2O60583 730 aaKnown RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 SLC25A12O75746 678 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 NEURL1O76050 574 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 MYO1DO94832 1006 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 C1QAP02745 245 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 SP1P08047 785 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 TPP2P29144 1249 aaPredicted RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 KCNC1P48547 511 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 CYB561P49447 251 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 CLCN2P51788 898 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 PLA2G16P53816 162 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 MTTPP55157 894 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 MLF1P58340 268 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 ALDH6A1Q02252 535 aaKnown RBP10.37□□□□□ -0.75
CCDC47-206ENST00000584112 IRF8Q02556 426 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 SLC13A2Q13183 592 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 RUNX2Q13950 521 aa10.37□□□□□ -0.75
CCDC47-206ENST00000584112 DOC2AQ14183 400 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms