RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 ADARP55265 1226 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 GPR50Q13585 617 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 FASTKQ14296 549 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 KCTD2Q14681 263 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 CCL14Q16627 93 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 PLPP4Q5VZY2 271 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 PM20D1Q6GTS8 502 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 CAVIN1Q6NZI2 390 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 TMEM99Q8N816 258 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 KIAA0895Q8NCT3 520 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNRF1Q8ND25 227 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 SEPT8Q92599 483 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 ZIM3Q96PE6 472 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 GBP5Q96PP8 586 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 SLC39A8Q9C0K1 460 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 CUTCQ9NTM9 273 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 ARMCX1Q9P291 453 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 TMED7Q9Y3B3 224 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 MRPL11Q9Y3B7 192 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 FBXO7Q9Y3I1 522 aa2.4□□□□□ -2.03
SMCHD1-206ENST00000581631 TRAV34A0A0B4J273 112 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 ILVBLA1L0T0 632 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 OR5H15A6NDH6 313 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 H7C0S8 307 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 CTDSPLO15194 276 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 ST8SIA3O43173 380 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 GRAP2O75791 330 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 RLN1P04808 185 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 LYNP07948 512 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 TSPY3P0CV98 308 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 TSPY8P0CW00 308 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 ACKR3P25106 362 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 GJB2P29033 226 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 GP5P40197 560 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 ID1P41134 155 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 FKBP1BP68106 108 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 SLC22A6Q4U2R8 563 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF776Q68DI1 518 aaPredicted RBP2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 ARMCX5Q6P1M9 558 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 IGFL3Q6UXB1 125 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 NLRP14Q86W24 1093 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 THNSL1Q8IYQ7 743 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 RNF149Q8NC42 400 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 DNASE1L2Q92874 299 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 HSD17B14Q9BPX1 270 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 CCM2Q9BSQ5 444 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 LSG1Q9H089 658 aaKnown RBP2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 S100A14Q9HCY8 104 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 MED17Q9NVC6 651 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 ETV7Q9Y603 341 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 POMT1Q9Y6A1 747 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 POGZQ7Z3K3 1410 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 PFASO15067 1338 aa2.39□□□□□ -2.03
SMCHD1-206ENST00000581631 TRAV9-2A0A087WT02 112 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 FAM168BA1KXE4 195 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 BCLAF3A2AJT9 711 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 YDJCA8MPS7 323 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF724A8MTY0 619 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 HMGB1P1B2RPK0 211 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 KBTBD13C9JR72 458 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 NEDD8-MDP1E9PL57 170 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 LRRTM2O43300 516 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 FRAT2O75474 233 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 CLN5O75503 358 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 KBTBD11O94819 623 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 OR9G9P0C7N8 305 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 UMPSP11172 480 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF19P17023 458 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 CHRNA3P32297 505 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 KCNJ1P48048 391 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 IST1P53990 364 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 RFTN1Q14699 578 aaPredicted RBP2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 PCK2Q16822 640 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 TIMM50Q3ZCQ8 353 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 VWA2Q5GFL6 755 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 LINC00242Q5T6M2 205 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 LYPLAL1Q5VWZ2 237 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 CASC4Q6P4E1 433 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 RFWD3Q6PCD5 774 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 SHQ1Q6PI26 577 aaKnown RBP2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF730Q6ZMV8 503 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 NAXDQ8IW45 347 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 C4orf19Q8IY42 314 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 NME8Q8N427 588 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF781Q8N8C0 355 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 UXS1Q8NBZ7 420 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 C8orf46Q8TAG6 207 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 ERP27Q96DN0 273 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 RANBP9Q96S59 729 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 ATG101Q9BSB4 218 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 TRIM7Q9C029 511 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 ZNF665Q9H7R5 613 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 GIMAP2Q9UG22 337 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 ITGA11Q9UKX5 1188 aa2.38□□□□□ -2.03
SMCHD1-206ENST00000581631 FOXI3A8MTJ6 420 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 HAT1O14929 419 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 SRPX2O60687 465 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 SIX3O95343 332 aaPredicted RBP2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 PIGRP01833 764 aa2.37□□□□□ -2.03
SMCHD1-206ENST00000581631 IGHG3P01860 377 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms