RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ZNF750Q32MQ0 723 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 KRTAP21-3Q3LHN1 58 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 PAGE2BQ5JRK9 111 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 CDKL4Q5MAI5 379 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 CLNKQ7Z7G1 428 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 SLCO2A1Q92959 643 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 RHBDF1Q96CC6 855 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 RUNDC3BQ96NL0 473 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 QRFPRQ96P65 431 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 KCNC2Q96PR1 638 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 TTYH2Q9BSA4 534 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 EFCAB11Q9BUY7 163 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 LIN28AQ9H9Z2 209 aaKnown RBP16.6■□□□□ 0.25
MKS1-209ENST00000580127 POPDC3Q9HBV1 291 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 LYRM4Q9HD34 91 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 PNPLA3Q9NST1 481 aa16.6■□□□□ 0.25
MKS1-209ENST00000580127 ZNF223Q9UK11 482 aaPredicted RBP16.6■□□□□ 0.25
MKS1-209ENST00000580127 A0A1B0GVC2 190 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 FAM95CA0A1B0GW59 222 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 CTAGE15A4D2H0 777 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 C17orf105B2RV13 164 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 CYR61O00622 381 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 NADKO95544 446 aaPredicted RBP16.59■□□□□ 0.25
MKS1-209ENST00000580127 IGHG3P01860 377 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 CD99P14209 185 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 GABRA1P14867 456 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 PPP2R1BP30154 601 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 GDF5P43026 501 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 HK2P52789 917 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 PGGT1BP53609 377 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 RNF4P78317 190 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 FOLH1Q04609 750 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 SLC25A35Q3KQZ1 300 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 ADPRMQ3LIE5 342 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 STEAP4Q687X5 459 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 ABHD17CQ6PCB6 329 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 TRILQ7L0X0 811 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 CTAGE6Q86UF2 777 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 ZC3HC1Q86WB0 502 aaKnown RBP16.59■□□□□ 0.25
MKS1-209ENST00000580127 PTPMT1Q8WUK0 201 aaPredicted RBP16.59■□□□□ 0.25
MKS1-209ENST00000580127 PTCD3Q96EY7 689 aaKnown RBP16.59■□□□□ 0.25
MKS1-209ENST00000580127 TSPAN17Q96FV3 270 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 TBCDQ9BTW9 1192 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 DNAJC11Q9NVH1 559 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.59■□□□□ 0.25
MKS1-209ENST00000580127 ALKBH4Q9NXW9 302 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 SLC17A6Q9P2U8 582 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 TEX264Q9Y6I9 313 aa16.59■□□□□ 0.25
MKS1-209ENST00000580127 ATP6AP2A0A1C7CYW4 349 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 FAM221AA4D161 298 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 TMEM200CA6NKL6 621 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 C4orf51C9J302 202 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 AQP7O14520 342 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 PRKNO60260 465 aaPredicted RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 HCN1O60741 890 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 ATP6AP2O75787 350 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 GLSO94925 669 aaPredicted RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 S100BP04271 92 aaPredicted RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 GLI4P10075 376 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 SLC6A12P48065 614 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 TAS2R39P59534 338 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 TSNQ15631 228 aaKnown RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 MPEG1Q2M385 716 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 AP5B1Q2VPB7 878 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 SULT1C3Q6IMI6 304 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 TRMT10BQ6PF06 316 aaKnown RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 C16orf47Q6ZP98 133 aaPredicted RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 CHSY3Q70JA7 882 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 GPSM1Q86YR5 675 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 SNX31Q8N9S9 440 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 UBE2E3Q969T4 207 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 RBM18Q96H35 190 aaKnown RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 SCYL1Q96KG9 808 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 AICDAQ9GZX7 198 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 DDX47Q9H0S4 455 aaKnown RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 DNAJB12Q9NXW2 375 aaKnown RBP16.58■□□□□ 0.24
MKS1-209ENST00000580127 WWOXQ9NZC7 414 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 TXNDC16Q9P2K2 825 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 B4GALT7Q9UBV7 327 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 IKZF3Q9UKT9 509 aa16.58■□□□□ 0.24
MKS1-209ENST00000580127 EML6Q6ZMW3 1958 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 NCF1BA6NI72 391 aaPredicted RBP16.57■□□□□ 0.24
MKS1-209ENST00000580127 NCF1CA8MVU1 366 aaPredicted RBP16.57■□□□□ 0.24
MKS1-209ENST00000580127 ZSCAN12O43309 604 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 STK16O75716 305 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 KRT38O76015 456 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 NCF1P14598 390 aaPredicted RBP16.57■□□□□ 0.24
MKS1-209ENST00000580127 DNAJA1P31689 397 aaKnown RBP16.57■□□□□ 0.24
MKS1-209ENST00000580127 GGT5P36269 586 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 MAGEA5P43359 124 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 PPP2R2AP63151 447 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 POU4F1Q01851 419 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 TGFBIQ15582 683 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 HYAL4Q2M3T9 481 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 TMEM35AQ53FP2 167 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 SLC22A10Q63ZE4 541 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 ARSKQ6UWY0 536 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 DND1Q8IYX4 353 aaKnown RBP16.57■□□□□ 0.24
MKS1-209ENST00000580127 SLC15A4Q8N697 577 aa16.57■□□□□ 0.24
MKS1-209ENST00000580127 TMEM251Q8N6I4 163 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms