RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 OR8J1Q8NGP2 316 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 TRMT10AQ8TBZ6 339 aaKnown RBP2.91□□□□□ -1.94
KPNB1-208ENST00000580019 SLC2A14Q8TDB8 520 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 UBTD2Q8WUN7 234 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 CCDC107Q8WV48 283 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 SMPDL3BQ92485 455 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 PIGBQ92521 554 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 INPP5DQ92835 1189 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 DHX58Q96C10 678 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 PYCR2Q96C36 320 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 LRRC39Q96DD0 335 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 THOC1Q96FV9 657 aaKnown RBP2.91□□□□□ -1.94
KPNB1-208ENST00000580019 C4orf36Q96KX1 117 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 CBWD1Q9BRT8 395 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 SIKE1Q9BRV8 207 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 TRMT61BQ9BVS5 477 aaKnown RBP2.91□□□□□ -1.94
KPNB1-208ENST00000580019 TM2D2Q9BX73 214 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 GON7Q9BXV9 100 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 PANK2Q9BZ23 570 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 B3GNT4Q9C0J1 378 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 IQCGQ9H095 443 aaKnown RBP2.91□□□□□ -1.94
KPNB1-208ENST00000580019 KCNN2Q9H2S1 579 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 DCLRE1BQ9H816 532 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 C10orf88Q9H8K7 445 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 SEBOXQ9HB31 216 aaPredicted RBP2.91□□□□□ -1.94
KPNB1-208ENST00000580019 MOV10Q9HCE1 1003 aaKnown RBP2.91□□□□□ -1.94
KPNB1-208ENST00000580019 APMAPQ9HDC9 416 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 HPS4Q9NQG7 708 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 OSER1Q9NX31 292 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 NPAP1Q9NZP6 1156 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 SPATA7Q9P0W8 599 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 RNF14Q9UBS8 474 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 NARFQ9UHQ1 456 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 NOCTQ9UK39 431 aaKnown RBP2.91□□□□□ -1.94
KPNB1-208ENST00000580019 PCDHA7Q9UN72 937 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 ERVK-19Q9WJR5 959 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 MRPS33Q9Y291 106 aaKnown RBP2.91□□□□□ -1.94
KPNB1-208ENST00000580019 OR10H1Q9Y4A9 318 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 SLCO1B1Q9Y6L6 691 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 COMMD3-BMI1R4GMX3 469 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 CUL9Q8IWT3 2517 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 PRAG1Q86YV5 1406 aa2.91□□□□□ -1.94
KPNB1-208ENST00000580019 NALCNQ8IZF0 1738 aa2.9□□□□□ -1.94
KPNB1-208ENST00000580019 TULP4Q9NRJ4 1543 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 LOC100653049A0A140TA62 436 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 SLC22A23A1A5C7 686 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 OR2M5A3KFT3 312 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 GSAPA4D1B5 854 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 CASTOR2A6NHX0 329 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 OR52A4PA6NMU1 304 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 C15orf62A8K5M9 175 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 B4DGG1 531 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 FAM90A26D6RGX4 464 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 F8VVB4 439 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 F8VWA3 439 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 GOLGA8SH3BPF8 625 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 CETN3O15182 167 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 RNF113AO15541 343 aaKnown RBP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 ECE2O60344 883 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 KRT34O76011 436 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 RNF8O76064 485 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 PIGNO95427 931 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 SYNGR4O95473 234 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 OTCP00480 354 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 IGHEP01854 428 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 MT-ND1P03886 318 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 CA3P07451 260 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 CHRNGP07510 517 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 GSTA2P09210 222 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 CCDC172P0C7W6 258 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 SMIM18P0DKX4 95 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 S1PR1P21453 382 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 PTBP1P26599 531 aaKnown RBP eCLIP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 SSTR1P30872 391 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 HNRNPH1P31943 449 aaKnown RBP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 PRDX2P32119 198 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 TNFSF8P32971 234 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 AVPR1AP37288 418 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 MAGEA11P43364 429 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 SYKP43405 635 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 TNFRSF4P43489 277 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 OR1G1P47890 313 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 SLC6A8P48029 635 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 RGS4P49798 205 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 LBX1P52954 281 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 HADHBP55084 474 aaKnown RBP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 CARD18P57730 90 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 KCNK10P57789 538 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 EIF3EP60228 445 aaKnown RBP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 RPP38P78345 283 aaKnown RBP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 MAT1AQ00266 395 aaKnown RBP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 MAP2K1Q02750 393 aaPredicted RBP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 ACY1Q03154 408 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 CSTF1Q05048 431 aaKnown RBP2.9□□□□□ -1.95
KPNB1-208ENST00000580019 TROAPQ12815 778 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 NME3Q13232 169 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 BCL7AQ4VC05 210 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 AWAT1Q58HT5 328 aa2.9□□□□□ -1.95
KPNB1-208ENST00000580019 CMPK2Q5EBM0 449 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms