RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 ZIM3Q96PE6 472 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 BBC3Q96PG8 261 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 F2RL3Q96RI0 385 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 WDR77Q9BQA1 342 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 FAIM2Q9BWQ8 316 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 UNKQ9C0B0 810 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 ADAP2Q9NPF8 381 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 RRAGDQ9NQL2 400 aaPredicted RBP8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 PRTFDC1Q9NRG1 225 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 LANCL2Q9NS86 450 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 KCMF1Q9P0J7 381 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 TP53TG5Q9Y2B4 290 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 PLLPQ9Y342 182 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 CLCA3PQ9Y6N3 262 aa8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 DSPP15924 2871 aaKnown RBP8.06□□□□□ -1.12
PPP4R1-210ENST00000578557 MAP1BP46821 2468 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 C1orf226A1L170 272 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SAGE2PA6NJ88 616 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 NPIPB8E9PQR5 432 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 OR7A17O14581 309 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 TM9SF1O15321 606 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 BIRC5O15392 142 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 RGS16O15492 202 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 CTIFO43310 598 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 PROM1O43490 865 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 NRP2O60462 931 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 NPHS1O60500 1241 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 BCAS2O75934 225 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ZFAND5O76080 213 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SLITRK5O94991 958 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SOX30O94993 753 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 MED26O95402 600 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 PROCP04070 461 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 UQCRHP07919 91 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 FGF4P08620 206 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 UROSP10746 265 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 DRD2P14416 443 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 CD22P20273 847 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 CPN2P22792 545 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 HMOX2P30519 316 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 HNRNPH1P31943 449 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SLC18A1P54219 525 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SLC13A2Q13183 592 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SLAMF1Q13291 335 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 RUNX2Q13950 521 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 HEPACAMQ14CZ8 416 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 PCOLCEQ15113 449 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 BTBD16Q32M84 506 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 C18orf21Q32NC0 220 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SFT2D3Q587I9 215 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 MRM1Q6IN84 353 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 GALNT18Q6P9A2 607 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 PAPD4Q6PIY7 484 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 TRABD2AQ86V40 505 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 METTL4Q8N3J2 472 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SLC15A4Q8N697 577 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 METTL27Q8N6F8 245 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 NATD1Q8N6N6 113 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 BANPQ8N9N5 519 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 CCDC63Q8NA47 563 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 FAM98AQ8NCA5 519 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 B3GNT7Q8NFL0 401 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 OR4F6Q8NGB9 312 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 DNAJB14Q8TBM8 379 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ELP5Q8TE02 316 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SELENOMQ8WWX9 145 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ERP27Q96DN0 273 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 APOPT1Q96IL0 206 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 NUDT9Q9BW91 350 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ILKAPQ9H0C8 392 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 SPNS1Q9H2V7 528 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 KLHL31Q9H511 634 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 RPF2Q9H7B2 306 aaKnown RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 TRIM45Q9H8W5 580 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ZNF160Q9HCG1 818 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ZNF358Q9NW07 568 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ARGLU1Q9NWB6 273 aaPredicted RBP8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 HCN3Q9P1Z3 774 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 MAPRE3Q9UPY8 281 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 CFL2Q9Y281 166 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 TMED5Q9Y3A6 229 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 LAMA5O15230 3695 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 MYLKQ15746 1914 aa8.05□□□□□ -1.12
PPP4R1-210ENST00000578557 ZFC3H1O60293 1989 aaKnown RBP8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 A0A1W2PPM1 405 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 A6NL46 340 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 OR6C76A6NM76 312 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 G3V2L1 256 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 SLC28A1O00337 649 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 SLC28A2O43868 658 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 PRAMEF4O60810 478 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 B4GALT2O60909 372 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 VPS4BO75351 444 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 CRCPO75575 148 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 MYO1DO94832 1006 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 ZWINTO95229 277 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 SIX3O95343 332 aaPredicted RBP8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 GPR75O95800 540 aa8.04□□□□□ -1.12
PPP4R1-210ENST00000578557 CRYABP02511 175 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms