RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 WDR77Q9BQA1 342 aaPredicted RBP6.64□□□□□ -1.35
CASC3-205ENST00000577605 MRPL57Q9BQC6 102 aaKnown RBP6.64□□□□□ -1.35
CASC3-205ENST00000577605 TMEM79Q9BSE2 394 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 TBCDQ9BTW9 1192 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 SLC29A3Q9BZD2 475 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 VN1R1Q9GZP7 353 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 REXO4Q9GZR2 422 aaKnown RBP6.64□□□□□ -1.35
CASC3-205ENST00000577605 RNF32Q9H0A6 362 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 VPS11Q9H270 941 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 MS4A12Q9NXJ0 267 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 ABI3Q9P2A4 366 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 NFU1Q9UMS0 254 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 SH2B3Q9UQQ2 575 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 STK38LQ9Y2H1 464 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 MRPS2Q9Y399 296 aaKnown RBP6.64□□□□□ -1.35
CASC3-205ENST00000577605 PKD1L2Q7Z442 2459 aa6.64□□□□□ -1.35
CASC3-205ENST00000577605 ZFHX4Q86UP3 3567 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 DYTNA2CJ06 578 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 H0YIV9 168 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 H3BQF6 201 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 SGK494L7N484 410 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 RIPK2O43353 540 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 CHST10O43529 356 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 B3GALT2O43825 422 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 VPS4BO75351 444 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 RDH16O75452 317 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 TUBBP07437 444 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 RHOXF2BP0C7M4 288 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 PRR35P0CG20 571 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ZNF888P0CJ79 500 aaPredicted RBP6.63□□□□□ -1.35
CASC3-205ENST00000577605 PF4V1P10720 104 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 COX6A1P12074 109 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 MTHFD2P13995 350 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 TAC1P20366 129 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 PTX3P26022 381 aaPredicted RBP6.63□□□□□ -1.35
CASC3-205ENST00000577605 MTTPP55157 894 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 TAS2R50P59544 299 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 BTN3A2P78410 334 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 RHAGQ02094 409 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ZNF33BQ06732 778 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 DLG1Q12959 904 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 CHAF1BQ13112 559 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 BMPR2Q13873 1038 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 KRT72Q14CN4 511 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 TERF2Q15554 542 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 INAQ16352 499 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 PFKFB4Q16877 469 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 TOR1AIP1Q5JTV8 583 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 WIPI1Q5MNZ9 446 aaPredicted RBP6.63□□□□□ -1.35
CASC3-205ENST00000577605 Q6ZS92 163 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 SHISA6Q6ZSJ9 500 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 VN1R5Q7Z5H4 357 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ANKRD37Q7Z713 158 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 PDSS2Q86YH6 399 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ZNF595Q8IYB9 648 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 HORMAD2Q8N7B1 307 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 L3MBTL4Q8NA19 623 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 GALNT11Q8NCW6 608 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 LRRN4CLQ8ND94 238 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 SUN3Q8TAQ9 357 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ZCCHC10Q8TBK6 192 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 DCAKDQ8WVC6 231 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 KCTD4Q8WVF5 259 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 HAS2Q92819 552 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 MS4A6EQ96DS6 147 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 CCDC126Q96EE4 140 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 IMMP1LQ96LU5 166 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ZNF354BQ96LW1 612 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 GPR78Q96P69 363 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 RHOXF2Q9BQY4 288 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 NTMT1Q9BV86 223 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ILKAPQ9H0C8 392 aaPredicted RBP6.63□□□□□ -1.35
CASC3-205ENST00000577605 MRPL46Q9H2W6 279 aaKnown RBP6.63□□□□□ -1.35
CASC3-205ENST00000577605 CLMPQ9H6B4 373 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 SYNPO2LQ9H987 977 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 COPS7BQ9H9Q2 264 aaPredicted RBP6.63□□□□□ -1.35
CASC3-205ENST00000577605 ZNF160Q9HCG1 818 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 LYRM4Q9HD34 91 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 AGPAT4Q9NRZ5 378 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 HCN3Q9P1Z3 774 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 DCDC2Q9UHG0 476 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ZNF490Q9ULM2 529 aaPredicted RBP6.63□□□□□ -1.35
CASC3-205ENST00000577605 VPS4AQ9UN37 437 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 PCDHGB6Q9Y5F9 930 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 WDFY3Q8IZQ1 3526 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ZZEF1O43149 2961 aa6.63□□□□□ -1.35
CASC3-205ENST00000577605 ACACAQ13085 2346 aa6.62□□□□□ -1.35
CASC3-205ENST00000577605 TRAV17A0A0B4J275 112 aa6.62□□□□□ -1.35
CASC3-205ENST00000577605 CCDC151A5D8V7 595 aa6.62□□□□□ -1.35
CASC3-205ENST00000577605 TRIM49D1C9J1S8 452 aa6.62□□□□□ -1.35
CASC3-205ENST00000577605 UBXN8O00124 270 aa6.62□□□□□ -1.35
CASC3-205ENST00000577605 FOXE1O00358 373 aaPredicted RBP6.62□□□□□ -1.35
CASC3-205ENST00000577605 ERI3O43414 337 aaKnown RBP6.62□□□□□ -1.35
CASC3-205ENST00000577605 ZNF500O60304 480 aaPredicted RBP6.62□□□□□ -1.35
CASC3-205ENST00000577605 PRKD3O94806 890 aa6.62□□□□□ -1.35
CASC3-205ENST00000577605 SORBS2O94875 1100 aaKnown RBP6.62□□□□□ -1.35
CASC3-205ENST00000577605 CLDN9O95484 217 aa6.62□□□□□ -1.35
CASC3-205ENST00000577605 UQCRHP07919 91 aa6.62□□□□□ -1.35
CASC3-205ENST00000577605 GSTP1P09211 210 aaKnown RBP6.62□□□□□ -1.35
CASC3-205ENST00000577605 PPP2R1BP30154 601 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms