RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 MCUQ8NE86 351 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 SH3GL2Q99962 352 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 DESI2Q9BSY9 194 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 SPNS1Q9H2V7 528 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 KLHL31Q9H511 634 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 LIN28AQ9H9Z2 209 aaKnown RBP12.35□□□□□ -0.43
COPS3-214ENST00000577246 IARS2Q9NSE4 1012 aaKnown RBP12.35□□□□□ -0.43
COPS3-214ENST00000577246 RYDENQ9NUL5 291 aaKnown RBP12.35□□□□□ -0.43
COPS3-214ENST00000577246 BEX4Q9NWD9 120 aaPredicted RBP12.35□□□□□ -0.43
COPS3-214ENST00000577246 QPCTLQ9NXS2 382 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 ATG4BQ9Y4P1 393 aa12.35□□□□□ -0.43
COPS3-214ENST00000577246 ARHGEF9O43307 516 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 ERI3O43414 337 aaKnown RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 H2AFYO75367 372 aaKnown RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 GUCA1CO95843 209 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 CELA3AP09093 270 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 TNNI3P19429 210 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 DNASE1L1P49184 302 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 RNF4P78317 190 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 STX4Q12846 297 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 SERTAD2Q14140 314 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 PCBP2Q15366 365 aaKnown RBP eCLIP12.34□□□□□ -0.43
COPS3-214ENST00000577246 TRIP13Q15645 432 aaPredicted RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 TRIM40Q6P9F5 258 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 Q71RC1 249 aaPredicted RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 THOC6Q86W42 341 aaKnown RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 LACC1Q8IV20 430 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 ULK2Q8IYT8 1036 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 DND1Q8IYX4 353 aaKnown RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 FAM47BQ8NA70 645 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 RELL2Q8NC24 303 aaPredicted RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 SLC22A8Q8TCC7 542 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 NUDT8Q8WV74 236 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 KIAA1191Q96A73 305 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 SERPINB12Q96P63 405 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 CNPPD1Q9BV87 410 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 OR8D2Q9GZM6 311 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 ZNF703Q9H7S9 590 aaPredicted RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 COPS7BQ9H9Q2 264 aaPredicted RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 ACKR4Q9NPB9 350 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 TUBA8Q9NY65 449 aaPredicted RBP12.34□□□□□ -0.43
COPS3-214ENST00000577246 VTI1BQ9UEU0 232 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 GUCA1BQ9UMX6 200 aa12.34□□□□□ -0.43
COPS3-214ENST00000577246 ACANP16112 2415 aa12.33□□□□□ -0.43
COPS3-214ENST00000577246 AHRRA9YTQ3 701 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 DYRK3O43781 588 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 CTNSO60931 367 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 IL2RAP01589 272 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 CCL3P10147 92 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 GNAZP19086 355 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 TIMP3P35625 211 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 ZNF75DP51815 510 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 DCAF7P61962 342 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 KCNJ2P63252 427 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 SORDQ00796 357 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 TIAL1Q01085 375 aaKnown RBP eCLIP12.33□□□□□ -0.44
COPS3-214ENST00000577246 TGM3Q08188 693 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 RUNX2Q13950 521 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 MPEG1Q2M385 716 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 ANKRD22Q5VYY1 191 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 SLC22A10Q63ZE4 541 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 CLNKQ7Z7G1 428 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 KLHDC8AQ8IYD2 350 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 PM20D2Q8IYS1 436 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 KRT78Q8N1N4 520 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 NEIL3Q8TAT5 605 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 CCT6BQ92526 530 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 MS4A6EQ96DS6 147 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 HSPBAP1Q96EW2 488 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 SERINC2Q96SA4 455 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 SMR3AQ99954 134 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 YIPF4Q9BSR8 244 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 PITHD1Q9GZP4 211 aaPredicted RBP12.33□□□□□ -0.44
COPS3-214ENST00000577246 ZNF395Q9H8N7 513 aaPredicted RBP12.33□□□□□ -0.44
COPS3-214ENST00000577246 ZFP64Q9NPA5 681 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 SPRR3Q9UBC9 169 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 CORO1CQ9ULV4 474 aaPredicted RBP12.33□□□□□ -0.44
COPS3-214ENST00000577246 CLDN16Q9Y5I7 305 aa12.33□□□□□ -0.44
COPS3-214ENST00000577246 LRIT2A6NDA9 550 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 C17orf105B2RV13 164 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 C4orf51C9J302 202 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 GOLGA8MH3BSY2 632 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 TGFBR3LH3BV60 316 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 CES2O00748 559 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 TTC4O95801 387 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 EPPINO95925 133 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 KRT14P02533 472 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 COX7A2P14406 83 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 ENDOUP21128 410 aaKnown RBP12.32□□□□□ -0.44
COPS3-214ENST00000577246 CEACAM8P31997 349 aaPredicted RBP12.32□□□□□ -0.44
COPS3-214ENST00000577246 HNMTP50135 292 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 MTTPP55157 894 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 CDKN2DP55273 166 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 NKX6-1P78426 367 aaPredicted RBP12.32□□□□□ -0.44
COPS3-214ENST00000577246 TMEM198Q66K66 360 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 TMIGD1Q6UXZ0 262 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 CHSY3Q70JA7 882 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 GALNT7Q86SF2 657 aa12.32□□□□□ -0.44
COPS3-214ENST00000577246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms