RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 KHDRBS2Q5VWX1 349 aaKnown RBP12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 RGMBQ6NW40 437 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 SERPINA13PQ6UXR4 307 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ACOT12Q8WYK0 555 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 CCDC120Q96HB5 630 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 CCDC115Q96NT0 180 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 S100A13Q99584 98 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 GAL3ST1Q99999 423 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ACSL6Q9UKU0 697 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 A0A0U1RQF3 1178 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 AOC2O75106 756 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ASGR1P07306 291 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 HOXD8P13378 290 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 HSD3B1P14060 373 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 HSD3B2P26439 372 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ISL1P61371 349 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 TCEA2Q15560 299 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 PRAMEF14Q5SWL7 426 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 PRAMEF13Q5VWM6 474 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC30A6Q6NXT4 461 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 PRSS55Q6UWB4 352 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 CHST9Q7L1S5 443 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 PIANPQ8IYJ0 282 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 FTMTQ8N4E7 242 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 USP3Q9Y6I4 520 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 TEX13CA0A0J9YWL9 993 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ACVR2AP27037 513 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 ADRA1AP35348 466 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 KCNC1P48547 511 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 KCNC3Q14003 757 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 CAMK1Q14012 370 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 TRAM2Q15035 370 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 RGNQ15493 299 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 FAM171BQ6P995 826 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 TMIGD1Q6UXZ0 262 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 RPTNQ6XPR3 784 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 SLC46A3Q7Z3Q1 461 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 FBXO22Q8NEZ5 403 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 OR2T35Q8NGX2 323 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 RIOK2Q9BVS4 552 aaKnown RBP12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 NMNAT1Q9HAN9 279 aaPredicted RBP12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 NUDT15Q9NV35 164 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 GPSM3Q9Y4H4 160 aa12.59□□□□□ -0.39
PCDHGB3-201ENST00000576222 A0A1W2PRQ8 180 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 F2P00734 622 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 PRKACAP17612 351 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 FNTBP49356 437 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 GP2P55259 537 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 TAS2R43P59537 309 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 SNTA1Q13424 505 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 SMCO1Q147U7 214 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 TSC22D1Q15714 1073 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 EIPR1Q53HC9 387 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 HLA-DQA1Q5Y7H0 255 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 Q6ZPB1 254 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 DNAJC22Q8N4W6 341 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 C2orf15Q8WU43 125 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 ZC3H10Q96K80 434 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 FBXO8Q9NRD0 319 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 CNOT2Q9NZN8 540 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 COL2A1P02458 1487 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 LOC285095A0A1B0GVY8 99 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 TBC1D3BA6NDS4 549 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 MANSC4A6NHS7 340 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 DUXAA6NLW8 204 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 C1QTNF3-AMACRE9PGA6 284 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 SCAMP2O15127 329 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 ICMTO60725 284 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 DUSP11O75319 330 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 ARHGEF15O94989 841 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 RCBTB2O95199 551 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 EOMESO95936 686 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 SDC1P18827 310 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 KELP23276 732 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 EDNRAP25101 427 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 SKP1P63208 163 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 DOC2AQ14183 400 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 PLEKHS1Q5SXH7 462 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 SYNPOQ8N3V7 929 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 WDR48Q8TAF3 677 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 GNPDA2Q8TDQ7 276 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 HAVCR1Q96D42 359 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 DHRS1Q96LJ7 313 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 CENPOQ9BU64 300 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 TRMT61BQ9BVS5 477 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 OR2AG1Q9H205 316 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 STOX2Q9P2F5 926 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 A0A075B6Q4 140 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 PQBP1O60828 265 aaKnown RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 ADORA3P0DMS8 318 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 ACRV1P26436 265 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 HMGCLP35914 325 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 ARF5P84085 180 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 UPP1Q16831 310 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 CBLL1Q75N03 491 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 INO80EQ8NBZ0 244 aaPredicted RBP12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 CHST4Q8NCG5 386 aa12.58□□□□□ -0.4
PCDHGB3-201ENST00000576222 RGMAQ96B86 450 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms