RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 KCNE2Q9Y6J6 123 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 CCDC88CQ9P219 2028 aa8.32□□□□□ -1.08
SMG6-218ENST00000575454 HRNRQ86YZ3 2850 aaPredicted RBP8.32□□□□□ -1.08
SMG6-218ENST00000575454 CACNA1CQ13936 2221 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 ZANQ9Y493 2812 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 ZCWPW2A0A1B0GU75 182 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 CLCA1A8K7I4 914 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 DYRK3O43781 588 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 PRKNO60260 465 aaPredicted RBP8.31□□□□□ -1.08
SMG6-218ENST00000575454 CTNSO60931 367 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 H2AFYO75367 372 aaKnown RBP8.31□□□□□ -1.08
SMG6-218ENST00000575454 HAUS5O94927 633 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 EPPINO95925 133 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 CELA3AP09093 270 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 TNNI3P19429 210 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 SAT1P21673 171 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 TACR1P25103 407 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 CEACAM8P31997 349 aaPredicted RBP8.31□□□□□ -1.08
SMG6-218ENST00000575454 HK2P52789 917 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 RAB38P57729 211 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 IL2P60568 153 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 KCNJ2P63252 427 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 RNF4P78317 190 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 CCZ1BP86790 482 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 CCZ1P86791 482 aaPredicted RBP8.31□□□□□ -1.08
SMG6-218ENST00000575454 PPP2R2BQ00005 443 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 SERTAD2Q14140 314 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 MPEG1Q2M385 716 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 TOR1AIP1Q5JTV8 583 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 NXPE4Q6UWF7 544 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 RAD9BQ6WBX8 426 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 C16orf47Q6ZP98 133 aaPredicted RBP8.31□□□□□ -1.08
SMG6-218ENST00000575454 CAPN12Q6ZSI9 719 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 P3H2Q8IVL5 708 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 PM20D2Q8IYS1 436 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 LRRC75A-AS1Q8N1F1 130 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 ANKRD53Q8N9V6 530 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 RNF214Q8ND24 703 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 LRRN4CLQ8ND94 238 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 NEIL3Q8TAT5 605 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 HSPBAP1Q96EW2 488 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 COX4I2Q96KJ9 171 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 DACH2Q96NX9 599 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 OR4K3Q96R72 315 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 MDFIQ99750 246 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 KLHL31Q9H511 634 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 LIN28AQ9H9Z2 209 aaKnown RBP8.31□□□□□ -1.08
SMG6-218ENST00000575454 TUBA8Q9NY65 449 aaPredicted RBP8.31□□□□□ -1.08
SMG6-218ENST00000575454 SPRR3Q9UBC9 169 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 COPS7AQ9UBW8 275 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 TLN2Q9Y4G6 2542 aa8.31□□□□□ -1.08
SMG6-218ENST00000575454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 TCRBV7S3A2A0A539 114 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 KIAA1324LA8MWY0 1029 aaPredicted RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 CASKO14936 926 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 NRDCO43847 1150 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 LY6G6DO95868 133 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 CCL3P10147 92 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 COX7A2P14406 83 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 CD53P19397 219 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PPP2R1BP30154 601 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 OPRM1P35372 400 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 DNASE1L1P49184 302 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 TGM3Q08188 693 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 RUNX2Q13950 521 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 ACSF3Q4G176 576 aaPredicted RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 HSP90AA5PQ58FG0 334 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PIGGQ5H8A4 983 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PAQR3Q6TCH7 311 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PRSS57Q6UWY2 283 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 CXXC5Q7LFL8 322 aaKnown RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 CAND1Q86VP6 1230 aaKnown RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 THOC6Q86W42 341 aaKnown RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 PRIMA1Q86XR5 153 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 KLHDC8AQ8IYD2 350 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 LRRC25Q8N386 305 aaPredicted RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 SLC15A4Q8N697 577 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 RELL2Q8NC24 303 aaPredicted RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 MCUQ8NE86 351 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 SLC22A8Q8TCC7 542 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PAQR8Q8TEZ7 354 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PTPMT1Q8WUK0 201 aaPredicted RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 SMPDL3BQ92485 455 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PIGTQ969N2 578 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 ISL2Q96A47 359 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 LINGO1Q96FE5 620 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 TSNARE1Q96NA8 513 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 SERINC2Q96SA4 455 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PIP5K1AQ99755 562 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 BDH2Q9BUT1 245 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 ALOXE3Q9BYJ1 711 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 OR8D2Q9GZM6 311 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 PITHD1Q9GZP4 211 aaPredicted RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 ZNF703Q9H7S9 590 aaPredicted RBP8.3□□□□□ -1.08
SMG6-218ENST00000575454 CNIH4Q9P003 139 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 CLDN16Q9Y5I7 305 aa8.3□□□□□ -1.08
SMG6-218ENST00000575454 C15orf38-AP3S2A0A0A6YYH1 394 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 LRIT2A6NDA9 550 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 C17orf105B2RV13 164 aa8.29□□□□□ -1.08
SMG6-218ENST00000575454 CYR61O00622 381 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms