RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 HNRNPH2P55795 449 aaKnown RBP31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 ACSM2AQ08AH3 577 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 HSP90B2PQ58FF3 399 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 SPDYAQ5MJ70 313 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 CCNYL2Q5T2Q4 361 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 ACSM2BQ68CK6 577 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 FAAH2Q6GMR7 532 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 APIPQ96GX9 242 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 PRDM9Q9NQV7 894 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 THAP1Q9NVV9 213 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 CCL27Q9Y4X3 112 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 ASB4Q9Y574 426 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 PTGDR2Q9Y5Y4 395 aa31.15■■■□□ 2.58
CTDNEP1-209ENST00000574205 BLACEA4D250 179 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 ACPPP15309 386 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 NR1D1P20393 614 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 HSD17B7P56937 341 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 NSDHLQ15738 373 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 DDIASQ8IXT1 998 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 PTCHD1Q96NR3 888 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 MED4Q9NPJ6 270 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 C19orf25Q9UFG5 118 aaPredicted RBP31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 KCNMB2Q9Y691 235 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 PCSK5Q92824 1860 aa31.14■■■□□ 2.58
CTDNEP1-209ENST00000574205 LOC102723996A0A087X1L8 192 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 NPIPB8E9PQR5 432 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 KLF11O14901 512 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 RGS14O43566 566 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 PRPH2P23942 346 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 BUD31P41223 144 aaPredicted RBP31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 HNRNPFP52597 415 aaKnown RBP31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 BTG2P78543 158 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 TNFRSF17Q02223 184 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 TMEM102Q8N9M5 508 aaPredicted RBP31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 TMEM52Q8NDY8 209 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 OR11G2Q8NGC1 345 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 C11orf24Q96F05 449 aaPredicted RBP31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 METTL2AQ96IZ6 378 aaKnown RBP31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 CCT7Q99832 543 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 PRTFDC1Q9NRG1 225 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 SIRT5Q9NXA8 310 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 MCM8Q9UJA3 840 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 ATG4BQ9Y4P1 393 aa31.14■■■□□ 2.57
CTDNEP1-209ENST00000574205 A0A1W2PQ72 361 aa31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 SNNO75324 88 aaPredicted RBP31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 LINC00032P0C843 101 aa31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 TLX1P31314 330 aaPredicted RBP31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 RPL14P50914 215 aaKnown RBP31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 MAPK12P53778 367 aa31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 BTKQ06187 659 aa31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 BORAQ6PGQ7 559 aa31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 C8orf44Q96CB5 159 aa31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 FER1L6-AS2Q96M78 137 aa31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 MESP1Q9BRJ9 268 aa31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 INTS9Q9NV88 658 aaKnown RBP31.13■■■□□ 2.57
CTDNEP1-209ENST00000574205 CACNA1GO43497 2377 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 DYNC1I1O14576 645 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 PIP5K1BO14986 540 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 PROM1O43490 865 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 RRADP55042 308 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 GALNT18Q6P9A2 607 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 Q6ZSR9 355 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 LANCL3Q6ZV70 420 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 SCUBE1Q8IWY4 988 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 APOBEC4Q8WW27 367 aaKnown RBP31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 TSLPQ969D9 159 aa31.12■■■□□ 2.57
CTDNEP1-209ENST00000574205 IGKV3D-11A0A0A0MRZ8 115 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 MAOAP21397 527 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 RHDQ02161 417 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 SLC13A2Q13183 592 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 TBR1Q16650 682 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 C18orf63Q68DL7 685 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 APLFQ8IW19 511 aaPredicted RBP31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 DYDC1Q8WWB3 177 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 ZNF75CPQ92670 426 aaPredicted RBP31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 RPF2Q9H7B2 306 aaKnown RBP31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 PFDN4Q9NQP4 134 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 FBXL4Q9UKA2 621 aa31.11■■■□□ 2.57
CTDNEP1-209ENST00000574205 ARGFXA6NJG6 315 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 PCDH7O60245 1069 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 GUCY1B2O75343 617 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 TIA1P31483 386 aaKnown RBP eCLIP31.1■■■□□ 2.572e-7■■■■□ 21.6
CTDNEP1-209ENST00000574205 RAE1P78406 368 aaKnown RBP31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 NR6A1Q15406 480 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 DCAF10Q5QP82 559 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 ANKRD37Q7Z713 158 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 OR2T11Q8NH01 316 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 EXTL1Q92935 676 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 ING2Q9H160 280 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 WDR41Q9HAD4 459 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 NECTIN3Q9NQS3 549 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 MED13Q9UHV7 2174 aa31.1■■■□□ 2.57
CTDNEP1-209ENST00000574205 A0A1W2PR48 441 aa31.09■■■□□ 2.57
CTDNEP1-209ENST00000574205 TCRBV16S1A1N1A0A5B0 115 aa31.09■■■□□ 2.57
CTDNEP1-209ENST00000574205 CTNSO60931 367 aa31.09■■■□□ 2.57
CTDNEP1-209ENST00000574205 SKAP2O75563 359 aaPredicted RBP31.09■■■□□ 2.57
CTDNEP1-209ENST00000574205 NR2F6P10588 404 aa31.09■■■□□ 2.57
CTDNEP1-209ENST00000574205 COX6A1P12074 109 aa31.09■■■□□ 2.57
CTDNEP1-209ENST00000574205 TRA2BP62995 288 aaKnown RBP31.09■■■□□ 2.57
CTDNEP1-209ENST00000574205 CPEB2Q7Z5Q1 589 aaKnown RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms