RNA–Protein interactions for RNA: ENST00000574029.5

VPS53-216, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4 BASIC

Gene VPS53, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-216ENST00000574029 OR8K3Q8NH51 312 aa19.54■□□□□ 0.72
VPS53-216ENST00000574029 OR14A16Q8NHC5 309 aa19.54■□□□□ 0.72
VPS53-216ENST00000574029 WDR34Q96EX3 536 aa19.54■□□□□ 0.72
VPS53-216ENST00000574029 NAPGQ99747 312 aaPredicted RBP19.54■□□□□ 0.72
VPS53-216ENST00000574029 DNAJC11Q9NVH1 559 aa19.54■□□□□ 0.72
VPS53-216ENST00000574029 NSMCE4AQ9NXX6 385 aa19.54■□□□□ 0.72
VPS53-216ENST00000574029 OR14I1A6ND48 311 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 E7ESA3 106 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 NPIPA2E9PIF3 369 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 NPIPA3F8WFD2 350 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 CLGNO14967 610 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 SEC31AO94979 1220 aaKnown RBP19.53■□□□□ 0.72
VPS53-216ENST00000574029 IGHG3P01860 377 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 HOXD4P09016 255 aaPredicted RBP19.53■□□□□ 0.72
VPS53-216ENST00000574029 CNR1P21554 472 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 DR1Q01658 176 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 PDIA2Q13087 525 aaKnown RBP19.53■□□□□ 0.72
VPS53-216ENST00000574029 FASTKD3Q14CZ7 662 aaKnown RBP19.53■□□□□ 0.72
VPS53-216ENST00000574029 ZNF750Q32MQ0 723 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 CDKL4Q5MAI5 379 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 NDUFAF5Q5TEU4 345 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 RTL4Q6ZR62 310 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 KLHL7Q8IXQ5 586 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 ZNF321PQ8N8H1 164 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 KIAA1191Q96A73 305 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 PTCD3Q96EY7 689 aaKnown RBP19.53■□□□□ 0.72
VPS53-216ENST00000574029 SCYL1Q96KG9 808 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 FAM173AQ9BQD7 235 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 ALOXE3Q9BYJ1 711 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 COPS7BQ9H9Q2 264 aaPredicted RBP19.53■□□□□ 0.72
VPS53-216ENST00000574029 PNPLA3Q9NST1 481 aa19.53■□□□□ 0.72
VPS53-216ENST00000574029 ZNF407Q9C0G0 2248 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 MYOCOSA0A1B0GUC4 107 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 A0A1B0GVC2 190 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 BCKDKO14874 412 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 RNF4P78317 190 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 TGM3Q08188 693 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 STX4Q12846 297 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 ILF2Q12905 390 aaKnown RBP19.52■□□□□ 0.72
VPS53-216ENST00000574029 CBLBQ13191 982 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 DOC2AQ14183 400 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 GK5Q6ZS86 529 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 GOLM1Q8NBJ4 401 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 OR5M3Q8NGP4 307 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 RUNDC3BQ96NL0 473 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 F2RL3Q96RI0 385 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 OR8D2Q9GZM6 311 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 CNOT10Q9H9A5 744 aaKnown RBP19.52■□□□□ 0.72
VPS53-216ENST00000574029 IL1RL2Q9HB29 575 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 LYRM4Q9HD34 91 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 WWOXQ9NZC7 414 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 SAR1BQ9Y6B6 198 aa19.52■□□□□ 0.72
VPS53-216ENST00000574029 G3V3Y1 287 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 ZNF354AO60765 605 aaPredicted RBP19.51■□□□□ 0.71
VPS53-216ENST00000574029 CD22P20273 847 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 ACVR2AP27037 513 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 KCNC1P48547 511 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 HSPA7P48741 367 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 POU4F1Q01851 419 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 SERTAD2Q14140 314 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 HYAL4Q2M3T9 481 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 FBXO48Q5FWF7 155 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 SULT1C3Q6IMI6 304 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 TRILQ7L0X0 811 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 UBE3DQ7Z6J8 389 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 CREG2Q8IUH2 290 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 FAM109AQ8N4B1 249 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 SPATA6LQ8N4H0 392 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 TMEM251Q8N6I4 163 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 SLC2A12Q8TD20 617 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 ESAMQ96AP7 390 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 SGCZQ96LD1 299 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 KCNC2Q96PR1 638 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 SMC6Q96SB8 1091 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 EFCAB11Q9BUY7 163 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 ROGDIQ9GZN7 287 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 SMYD2Q9NRG4 433 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 KCNN3Q9UGI6 736 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 MTO1Q9Y2Z2 717 aaKnown RBP19.51■□□□□ 0.71
VPS53-216ENST00000574029 LIPGQ9Y5X9 500 aa19.51■□□□□ 0.71
VPS53-216ENST00000574029 C17orf105B2RV13 164 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 LDB3O75112 727 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 STK16O75716 305 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 TNNI3P19429 210 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 MAGEA5P43359 124 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 SLC12A2P55011 1212 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 FOXO1Q12778 655 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 LAPTM5Q13571 262 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 PDK4Q16654 411 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 OPN5Q6U736 354 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 ZNF793Q6ZN11 406 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 GPSM1Q86YR5 675 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 SNX31Q8N9S9 440 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 OR5L2Q8NGL0 311 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 OR5M9Q8NGP3 310 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 SREK1Q8WXA9 508 aaKnown RBP19.5■□□□□ 0.71
VPS53-216ENST00000574029 MAPKAP1Q9BPZ7 522 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 ZNF559Q9BR84 538 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 TTYH2Q9BSA4 534 aa19.5■□□□□ 0.71
VPS53-216ENST00000574029 CAB39LQ9H9S4 337 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms