RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	SLBP	Q14493	270 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
ABR-223	ENST00000573895	METTL21C	Q5VZV1	264 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	TMEM205	Q6UW68	189 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	NDUFAF7	Q7L592	441 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.56	□□□□□ -0.24
ABR-223	ENST00000573895	KCT2	Q8NC54	265 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	OR9A4	Q8NGU2	314 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	RFWD2	Q8NHY2	731 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	WDR20	Q8TBZ3	569 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	SELENOM	Q8WWX9	145 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	TM9SF4	Q92544	642 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	PNPLA2	Q96AD5	504 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	C19orf60	Q96EN9	201 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	METTL2A	Q96IZ6	378 aa	Known RBP	13.56	□□□□□ -0.24
ABR-223	ENST00000573895	KCNA7	Q96RP8	456 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	YIPF2	Q9BWQ6	316 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	NUF2	Q9BZD4	464 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	BRF2	Q9HAW0	419 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	DCTN4	Q9UJW0	460 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	ARL2BP	Q9Y2Y0	163 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	FIS1	Q9Y3D6	152 aa		13.56	□□□□□ -0.24
ABR-223	ENST00000573895	LRRK2	Q5S007	2527 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895		A0A0G2JND7	137 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	ANKDD1B	A6NHY2	528 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	FFAR3	O14843	346 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	PIP5K1B	O14986	540 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	GPR42	O15529	346 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	NDUFS4	O43181	175 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	SORBS2	O94875	1100 aa	Known RBP	13.55	□□□□□ -0.24
ABR-223	ENST00000573895	HEXB	P07686	556 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	PCSK2	P16519	638 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	ITGA3	P26006	1051 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	CD97	P48960	835 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	FOXK1	P85037	733 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	MEF2A	Q02078	507 aa	Predicted RBP	13.55	□□□□□ -0.24
ABR-223	ENST00000573895	RGS1	Q08116	209 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	CSTF3	Q12996	717 aa	Known RBP	13.55	□□□□□ -0.24
ABR-223	ENST00000573895	RBBP5	Q15291	538 aa	Known RBP	13.55	□□□□□ -0.24
ABR-223	ENST00000573895	PDCD2	Q16342	344 aa	Predicted RBP	13.55	□□□□□ -0.24
ABR-223	ENST00000573895	SMU1	Q2TAY7	513 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	IRAK1BP1	Q5VVH5	260 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.55	□□□□□ -0.24
ABR-223	ENST00000573895	IGFL2	Q6UWQ7	119 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	ACAD11	Q709F0	780 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	DDIAS	Q8IXT1	998 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	PRSS58	Q8IYP2	241 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	RBMXL3	Q8N7X1	1067 aa	Known RBP	13.55	□□□□□ -0.24
ABR-223	ENST00000573895	ANKS4B	Q8N8V4	417 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	ANKRD53	Q8N9V6	530 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	ZNF740	Q8NDX6	193 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	OR51Q1	Q8NH59	317 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	CEP70	Q8NHQ1	597 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	ACTRT2	Q8TDY3	377 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	MAEL	Q96JY0	434 aa	Known RBP	13.55	□□□□□ -0.24
ABR-223	ENST00000573895	OR1F2P	Q96R84	312 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	MACROD1	Q9BQ69	325 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	TMEM120A	Q9BXJ8	343 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	TRIM4	Q9C037	500 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	LHPP	Q9H008	270 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	SPNS1	Q9H2V7	528 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	TUBB1	Q9H4B7	451 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	CLMP	Q9H6B4	373 aa		13.55	□□□□□ -0.24
ABR-223	ENST00000573895	RELN	P78509	3460 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	SHANK1	Q9Y566	2161 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	SETX	Q7Z333	2677 aa	Known RBP	13.54	□□□□□ -0.24
ABR-223	ENST00000573895	NPIPB8	E9PQR5	432 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	SDHD	O14521	159 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	DIAPH2	O60879	1101 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	SKAP2	O75563	359 aa	Predicted RBP	13.54	□□□□□ -0.24
ABR-223	ENST00000573895	PDYN	P01213	254 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	STATH	P02808	62 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	SERPINA6	P08185	405 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	LINC00032	P0C843	101 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	COX6A1	P12074	109 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	ALOX12	P18054	663 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	IL1RN	P18510	177 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	PTX3	P26022	381 aa	Predicted RBP	13.54	□□□□□ -0.24
ABR-223	ENST00000573895	AP2B1	P63010	937 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	SNRPN	P63162	240 aa	Known RBP	13.54	□□□□□ -0.24
ABR-223	ENST00000573895	IRX1	P78414	480 aa	Predicted RBP	13.54	□□□□□ -0.24
ABR-223	ENST00000573895	MAT1A	Q00266	395 aa	Known RBP	13.54	□□□□□ -0.24
ABR-223	ENST00000573895	ABRAXAS2	Q15018	415 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	TERF2	Q15554	542 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	SYT16	Q17RD7	645 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	NADK2	Q4G0N4	442 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	XKR7	Q5GH72	579 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	AGAP7P	Q5VUJ5	663 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	RIPOR1	Q6ZS17	1223 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	ABHD13	Q7L211	337 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	PRSS41	Q7RTY9	318 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	MAVS	Q7Z434	540 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	PDSS2	Q86YH6	399 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	PARP9	Q8IXQ6	854 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	CCDC197	Q8NCU1	140 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	HUS1B	Q8NHY5	278 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	C10orf82	Q8WW14	230 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	METTL21A	Q8WXB1	218 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	THOC1	Q96FV9	657 aa	Known RBP	13.54	□□□□□ -0.24
ABR-223	ENST00000573895	PPP3R2	Q96LZ3	170 aa		13.54	□□□□□ -0.24
ABR-223	ENST00000573895	RILP	Q96NA2	401 aa		13.54	□□□□□ -0.24

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