RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 VPS50Q96JG6 964 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 RILPQ96NA2 401 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 OR52B2Q96RD2 323 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 ELAC2Q9BQ52 826 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 EBF4Q9BQW3 602 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 CRB3Q9BUF7 120 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 ZNF717Q9BY31 904 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 TGIF2Q9GZN2 237 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 SOX17Q9H6I2 414 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 ADAM29Q9UKF5 820 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 FBXW2Q9UKT8 454 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 MRPS33Q9Y291 106 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 POLR3HQ9Y535 204 aaPredicted RBP12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 MRPS18BQ9Y676 258 aaKnown RBP12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 CACNA1BQ00975 2339 aa12.18□□□□□ -0.46
NPLOC4-214ENST00000573876 CCDC88CQ9P219 2028 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 GNG14A0A1W2PPG7 69 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 VSTM2BA6NLU5 285 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 NPIPB8E9PQR5 432 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 SCELO95171 688 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 BMP10O95393 424 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 HEXBP07686 556 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 FAM58BPP0C7Q3 252 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 DRD4P21917 467 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 JAK1P23458 1154 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 ARFIP2P53365 341 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 EMP2P54851 167 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 RPL38P63173 70 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 EMX2Q04743 252 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 LSM12Q3MHD2 195 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 MINDY4Q4G0A6 757 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 VWA2Q5GFL6 755 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 IL23RQ5VWK5 629 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 RIPOR1Q6ZS17 1223 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 ACAD11Q709F0 780 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 ZC3H7AQ8IWR0 971 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 SHISA5Q8N114 240 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 CA13Q8N1Q1 262 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 ZCCHC7Q8N3Z6 543 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 ACTRT2Q8TDY3 377 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 TBC1D20Q96BZ9 403 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 C11orf24Q96F05 449 aaPredicted RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 MAELQ96JY0 434 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 OR1F2PQ96R84 312 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 MAPKAP1Q9BPZ7 522 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 SIKE1Q9BRV8 207 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 C1orf50Q9BV19 199 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 EBPLQ9BY08 206 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 EPN3Q9H201 632 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 LYRM4Q9HD34 91 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 LYARQ9NX58 379 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 SIRT5Q9NXA8 310 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 BAIAP2L1Q9UHR4 511 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 C3orf18Q9UK00 162 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 G3BP2Q9UN86 482 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 EIF3LQ9Y262 564 aaKnown RBP12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 SSUH2Q9Y2M2 353 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 ZZEF1O43149 2961 aa12.17□□□□□ -0.46
NPLOC4-214ENST00000573876 CACNA1GO43497 2377 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 A0A0A6YYD5 115 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 FAM227AF5H4B4 570 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 TMPRSS11DO60235 418 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 PCDH7O60245 1069 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 CNOT3O75175 753 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 KLF7O75840 302 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 FHP07954 510 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 PRR35P0CG20 571 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 TIA1P31483 386 aaKnown RBP eCLIP12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 OTX2P32243 289 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 MAPK12P53778 367 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 LIM2P55344 173 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 RAB38P57729 211 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 KLC1Q07866 573 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 MAD2L1Q13257 205 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 ERV3-1Q14264 604 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 SSPNQ14714 243 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 SMU1Q2TAY7 513 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 CRTC2Q53ET0 693 aaPredicted RBP12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 MRM1Q6IN84 353 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 GALNT18Q6P9A2 607 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 SHISA6Q6ZSJ9 500 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 GPR180Q86V85 440 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 TM4SF18Q96CE8 201 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 IP6K3Q96PC2 410 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 CCT8L2Q96SF2 557 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 SPSB2Q99619 263 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 TMEM120AQ9BXJ8 343 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 NSRP1Q9H0G5 558 aaKnown RBP12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 TCF7L2Q9NQB0 619 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 SEMA3GQ9NS98 782 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 MS4A12Q9NXJ0 267 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 KCMF1Q9P0J7 381 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 KLHL14Q9P2G3 628 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 PHF11Q9UIL8 331 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 MCM8Q9UJA3 840 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 MKL2Q9ULH7 1088 aa12.16□□□□□ -0.46
NPLOC4-214ENST00000573876 DAPP1Q9UN19 280 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms