RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 RIBC2Q9H4K1 309 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 ACTL8Q9H568 366 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 SUCOQ9UBS9 1254 aaKnown RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 ATXN7L1Q9ULK2 861 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 EFCAB7A8K855 629 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 PIAS2O75928 621 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 AGR2O95994 175 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 PORP16435 677 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 AHRP35869 848 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 CASRP41180 1078 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 INPP1P49441 399 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 SCARB2Q14108 478 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 FZD2Q14332 565 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 ABRAXAS1Q6UWZ7 409 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 ATP6V1C2Q8NEY4 427 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 REXO5Q96IC2 774 aaKnown RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 SERINC2Q96SA4 455 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 ZNF184Q99676 751 aaPredicted RBP9.64□□□□□ -0.87
SMG6-213ENST00000573166 LPAR4Q99677 370 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 TMEM79Q9BSE2 394 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 CRB3Q9BUF7 120 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 DEFB126Q9BYW3 111 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 NAALAD2Q9Y3Q0 740 aa9.64□□□□□ -0.87
SMG6-213ENST00000573166 CSF2P04141 144 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 BCHEP06276 602 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 OTX2P32243 289 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 MAGEA12P43365 314 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 XCR1P46094 333 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 YAP1P46937 504 aaKnown RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 SPEM2Q0P670 501 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 OFCC1Q8IZS5 231 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 OR9A4Q8NGU2 314 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 MAGEE2Q8TD90 523 aaPredicted RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 CNBD2Q96M20 576 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 GPR78Q96P69 363 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 CD180Q99467 661 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 PCDHAC1Q9H158 963 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 SLC35C2Q9NQQ7 365 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 SPHK1Q9NYA1 384 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 NDUFA13Q9P0J0 144 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 ENOPH1Q9UHY7 261 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 WBP11Q9Y2W2 641 aaKnown RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 HAT1O14929 419 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 VILLO15195 856 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 TAPBPO15533 448 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 PEX1O43933 1283 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 TIPRLO75663 272 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 UGT2B17O75795 530 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 LINGO3P0C6S8 592 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 OCM2P0CE71 109 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 OCMP0CE72 109 aaPredicted RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 NELFEP18615 380 aaKnown RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 CCNA2P20248 432 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 ATP5A1P25705 553 aaKnown RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 RPS9P46781 194 aaKnown RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 PFN3P60673 137 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 CDK6Q00534 326 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 NNATQ16517 81 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 DECR1Q16698 335 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 GPR153Q6NV75 609 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 TTC33Q6PID6 262 aaPredicted RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 CASP12Q6UXS9 341 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 RNF44Q7L0R7 432 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 ZNF551Q7Z340 670 aaPredicted RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 RNF130Q86XS8 419 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 TREML1Q86YW5 311 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 ARMC8Q8IUR7 673 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 MICU2Q8IYU8 434 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 ADAMTS18Q8TE60 1221 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 TSPEARQ8WU66 669 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 CTPS2Q9NRF8 586 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 ANK1P16157 1881 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 SNTNA6NMZ2 147 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 SEMA3DO95025 777 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 ALPPP05187 535 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 LAMP1P11279 417 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 MYF5P13349 255 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 HIST1H1TP22492 207 aaPredicted RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 AVPR2P30518 371 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 OR1D4P47884 311 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 IL5RAQ01344 420 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 GRIK2Q13002 908 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 NRF1Q16656 503 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 ASRGL1Q7L266 308 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 DACT3Q96B18 629 aaPredicted RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 PELOQ9BRX2 385 aaKnown RBP9.63□□□□□ -0.87
SMG6-213ENST00000573166 MUC13Q9H3R2 512 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 SEMA6CQ9H3T2 930 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 EURLQ9NYK6 297 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 RNF215Q9Y6U7 377 aa9.63□□□□□ -0.87
SMG6-213ENST00000573166 IGLV3-16A0A075B6K0 115 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 OR7A17O14581 309 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 OPN1SWP03999 348 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 CD247P20963 164 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 MATN1P21941 496 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 EEFSECP57772 596 aaKnown RBP9.62□□□□□ -0.87
SMG6-213ENST00000573166 ABHD18Q0P651 414 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 CYHR1Q6ZMK1 362 aa9.62□□□□□ -0.87
SMG6-213ENST00000573166 PELI3Q8N2H9 469 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms