RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 FAM25GB3EWG6 89 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF670-ZNF695F2Z2N8 137 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 FOXE1O00358 373 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 SSX4O60224 188 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 GBAP04062 536 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 URODP06132 367 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 GABRR2P28476 465 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 SOX3P41225 446 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 XKP51811 444 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 GPR50Q13585 617 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TBRG1Q3YBR2 411 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 Q6ZVL8 140 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 HTR3DQ70Z44 454 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 OR8J1Q8NGP2 316 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 TMEM169Q96HH4 297 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 SDHCQ99643 169 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF334Q9HCZ1 680 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 INSL5Q9Y5Q6 135 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 NOX1Q9Y5S8 564 aa10.28□□□□□ -0.76
CCDC40-207ENST00000572253 ZNF106Q9H2Y7 1883 aaKnown RBP10.28□□□□□ -0.76
CCDC40-207ENST00000572253 H3BM21 787 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 TFECO14948 347 aaPredicted RBP10.27□□□□□ -0.76
CCDC40-207ENST00000572253 UQCRC2P22695 453 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 LIMS1P48059 325 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 DCDC1P59894 354 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 CNTN1Q12860 1018 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 TAB1Q15750 504 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 OTOP2Q7RTS6 562 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 RASGRP3Q8IV61 690 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 VANGL1Q8TAA9 524 aaPredicted RBP10.27□□□□□ -0.76
CCDC40-207ENST00000572253 TRIM63Q969Q1 353 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 DMRTB1Q96MA1 342 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 WDFY2Q96P53 400 aa10.27□□□□□ -0.76
CCDC40-207ENST00000572253 WRAP53Q9BUR4 548 aaKnown RBP10.27□□□□□ -0.76
CCDC40-207ENST00000572253 POLR2J3Q9H1A7 115 aaKnown RBP10.27□□□□□ -0.76
CCDC40-207ENST00000572253 RC3H2Q9HBD1 1191 aaKnown RBP10.27□□□□□ -0.76
CCDC40-207ENST00000572253 A0A1W2PQ45 241 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-207ENST00000572253 A0A1W2PQY0 241 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 ANKRD34BA5PLL1 514 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 FAAHO00519 579 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 TMCC2O75069 709 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 OLFM2O95897 454 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 TGFB1P01137 390 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 SOD2P04179 222 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 IL7P13232 177 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 DGKEP52429 567 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 CYP4F8P98187 520 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 MC1RQ01726 317 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 ILKQ13418 452 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF648Q5T619 568 aaPredicted RBP10.27□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM150AQ86TG1 271 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 RASSF5Q8WWW0 418 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 TSSK6Q9BXA6 273 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM245Q9H330 911 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 OR51B5Q9H339 312 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 TIGARQ9NQ88 270 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 DMRT3Q9NQL9 472 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 AHSPQ9NZD4 102 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 SPG21Q9NZD8 308 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 TRAV19A0A0A6YYK7 116 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 MEIOCA2RUB1 952 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 PRAMEF25A6NGN4 478 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 SAP18O00422 153 aaKnown RBP10.27□□□□□ -0.77
CCDC40-207ENST00000572253 H1F0P07305 194 aaKnown RBP10.27□□□□□ -0.77
CCDC40-207ENST00000572253 C1GALT1C1LP0DN25 315 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 ENDOUP21128 410 aaKnown RBP10.27□□□□□ -0.77
CCDC40-207ENST00000572253 PCBP3P57721 371 aaKnown RBP10.27□□□□□ -0.77
CCDC40-207ENST00000572253 PSPHP78330 225 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 EEF1A2Q05639 463 aaKnown RBP10.27□□□□□ -0.77
CCDC40-207ENST00000572253 PDE7AQ13946 482 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 HEPACAMQ14CZ8 416 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 CCSMST1Q4G0I0 132 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 Q6ZVU0 165 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 HSD11B1LQ7Z5J1 315 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 GPR65Q8IYL9 337 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 CMTM8Q8IZV2 173 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 PROKR2Q8NFJ6 384 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 SLC6A14Q9UN76 642 aa10.27□□□□□ -0.77
CCDC40-207ENST00000572253 IQCMA0A1B0GVH7 501 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 A0A1W2PQ09 198 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 HYKKA2RU49 373 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM88BA6NKF7 163 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 CSO75390 466 aaKnown RBP10.26□□□□□ -0.77
CCDC40-207ENST00000572253 CDRT1O95170 752 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 SOX14O95416 240 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 KLK1P06870 262 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 YES1P07947 543 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TSPAN19P0C672 248 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TBPL1P62380 186 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 MLLT11Q13015 90 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-207ENST00000572253 SPDYE7PQ495Y7 208 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 FAM71E1Q6IPT2 247 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 CEACAM20Q6UY09 585 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 IKBIPQ70UQ0 350 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 LAX1Q8IWV1 398 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 SIMC1Q8NDZ2 872 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 ENKURQ8TC29 256 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 BTN2A2Q8WVV5 523 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 ASB15Q8WXK1 588 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms