RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 OR4C11Q6IEV9 310 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 UBE3DQ7Z6J8 389 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 L3MBTL4Q8NA19 623 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 OR14A16Q8NHC5 309 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 DCAKDQ8WVC6 231 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 TMEM125Q96AQ2 219 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 MTBPQ96DY7 904 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 SIGLEC12Q96PQ1 595 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 DMRT3Q9NQL9 472 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 VTI1BQ9UEU0 232 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 PPT2Q9UMR5 302 aa16.12■□□□□ 0.17
RPA1-203ENST00000571058 TRBV11-1A0A0K0K1C0 115 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 EXOC1LA0A1B0GW35 172 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 ASPDHA6ND91 283 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 MAN1A2O60476 641 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 NEURL1O76050 574 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 IFNA16P05015 189 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 SNRPAP09012 282 aaKnown RBP16.11■□□□□ 0.17
RPA1-203ENST00000571058 PPP2R1BP30154 601 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 TLX1P31314 330 aaPredicted RBP16.11■□□□□ 0.17
RPA1-203ENST00000571058 HLCSP50747 726 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 HNRNPFP52597 415 aaKnown RBP16.11■□□□□ 0.17
RPA1-203ENST00000571058 RBPJQ06330 500 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 CUL3Q13618 768 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 SPINK14Q6IE38 97 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 SLC25A25Q6KCM7 469 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 GFRALQ6UXV0 394 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 ZNF793Q6ZN11 406 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 GOLGA7Q7Z5G4 137 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 LCA5Q86VQ0 697 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 PLD6Q8N2A8 252 aaKnown RBP16.11■□□□□ 0.17
RPA1-203ENST00000571058 ZCCHC7Q8N3Z6 543 aaKnown RBP16.11■□□□□ 0.17
RPA1-203ENST00000571058 MORN4Q8NDC4 146 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 TMEM52Q8NDY8 209 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 CSF3RQ99062 836 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 MAPKAP1Q9BPZ7 522 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 MRPL57Q9BQC6 102 aaKnown RBP16.11■□□□□ 0.17
RPA1-203ENST00000571058 ANKRD10Q9NXR5 420 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 SEC14L3Q9UDX4 400 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 PHF11Q9UIL8 331 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 NFU1Q9UMS0 254 aa16.11■□□□□ 0.17
RPA1-203ENST00000571058 DIDO1Q9BTC0 2240 aaKnown RBP16.11■□□□□ 0.17
RPA1-203ENST00000571058 TRIM49D1C9J1S8 452 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 FOXE1O00358 373 aaPredicted RBP16.1■□□□□ 0.17
RPA1-203ENST00000571058 SLC25A12O75746 678 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 ZFAND5O76080 213 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 CLDN9O95484 217 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 SP1P08047 785 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 CPN2P22792 545 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 GPR143P51810 404 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 DDX39BQ13838 428 aaKnown RBP16.1■□□□□ 0.17
RPA1-203ENST00000571058 KRTCAP3Q53RY4 240 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 PTGR2Q8N8N7 351 aaPredicted RBP16.1■□□□□ 0.17
RPA1-203ENST00000571058 TANKQ92844 425 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 NCLNQ969V3 563 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 ATP6V1E2Q96A05 226 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 SCYL1Q96KG9 808 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 MTERF1Q99551 399 aaKnown RBP16.1■□□□□ 0.17
RPA1-203ENST00000571058 NTMT1Q9BV86 223 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 ALOXE3Q9BYJ1 711 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 MRPL46Q9H2W6 279 aaKnown RBP16.1■□□□□ 0.17
RPA1-203ENST00000571058 OR51B5Q9H339 312 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 KLHL1Q9NR64 748 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 XPR1Q9UBH6 696 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 FETUBQ9UGM5 382 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 FBXW2Q9UKT8 454 aa16.1■□□□□ 0.17
RPA1-203ENST00000571058 NAV2Q8IVL1 2488 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 MAST4O15021 2626 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 TGFBR3LH3BV60 316 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 RTCAO00442 366 aaKnown RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 LRRTM2O43300 516 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 NME2P1O60361 137 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 SIX3O95343 332 aaPredicted RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 COX7A2P14406 83 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 NME2P22392 152 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 ARL1P40616 181 aaPredicted RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 CCNG1P51959 295 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 SLAMF1Q13291 335 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 CPSF6Q16630 551 aaKnown RBP eCLIP16.09■□□□□ 0.17
RPA1-203ENST00000571058 TIFABQ6ZNK6 161 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 MAMDC2Q7Z304 686 aaPredicted RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 CLNKQ7Z7G1 428 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 GPR180Q86V85 440 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 GPALPP1Q8IXQ4 340 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 TMEM156Q8N614 296 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 POGLUT1Q8NBL1 392 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 OR8K3Q8NH51 312 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 THAP3Q8WTV1 239 aaPredicted RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 RELTQ969Z4 430 aa16.09■□□□□ 0.17
RPA1-203ENST00000571058 NOL11Q9H8H0 719 aaKnown RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 RYDENQ9NUL5 291 aaKnown RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 LYARQ9NX58 379 aaKnown RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 KLF13Q9Y2Y9 288 aaPredicted RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 YARS2Q9Y2Z4 477 aaKnown RBP16.09■□□□□ 0.17
RPA1-203ENST00000571058 SAP18O00422 153 aaKnown RBP16.08■□□□□ 0.16
RPA1-203ENST00000571058 PLPP1O14494 284 aa16.08■□□□□ 0.16
RPA1-203ENST00000571058 RIPK2O43353 540 aa16.08■□□□□ 0.16
RPA1-203ENST00000571058 DYRK3O43781 588 aa16.08■□□□□ 0.16
RPA1-203ENST00000571058 SEMA3DO95025 777 aa16.08■□□□□ 0.16
RPA1-203ENST00000571058 UNC5CO95185 931 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms