RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 GRAP2O75791 330 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 GBAP04062 536 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 RPN1P04843 607 aaKnown RBP2.29□□□□□ -2.04
UBR1-209ENST00000569243 QDPRP09417 244 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 FAM86B2P0C5J1 330 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 FAM58BPP0C7Q3 252 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 PDGFRAP16234 1089 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 CEACAM7Q14002 265 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 C1orf141Q5JVX7 400 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 NEPROQ6NW34 567 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 RFWD3Q6PCD5 774 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 ZNF600Q6ZNG1 722 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 SPATA21Q7Z572 469 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 SLFN11Q7Z7L1 901 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 CARNMT1Q8N4J0 409 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 ZNF781Q8N8C0 355 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 RNF149Q8NC42 400 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 SMPDL3AQ92484 453 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 ST6GALNAC6Q969X2 333 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 SLC35C1Q96A29 364 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 FERMT1Q9BQL6 677 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 ATG101Q9BSB4 218 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 FAM129AQ9BZQ8 928 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 PLEKHA3Q9HB20 300 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 S100A14Q9HCY8 104 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 PCDHGA1Q9Y5H4 931 aa2.29□□□□□ -2.04
UBR1-209ENST00000569243 WI2-2373I1.2A0A1W2PRP0 233 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 ZNF724A8MTY0 619 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 CSDE1O75534 798 aaKnown RBP2.28□□□□□ -2.04
UBR1-209ENST00000569243 ANKRD34CP0C6C1 535 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 UMPSP11172 480 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 SKILP12757 684 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 ACKR3P25106 362 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 CRKLP46109 303 aaKnown RBP2.28□□□□□ -2.04
UBR1-209ENST00000569243 CAPZA1P52907 286 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 RPS27AP62979 156 aaKnown RBP2.28□□□□□ -2.04
UBR1-209ENST00000569243 ITPK1Q13572 414 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 TOMM20Q15388 145 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 C17orf58Q2M2W7 97 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 SPATA19Q7Z5L4 167 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 ANKRD46Q86W74 232 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 DZIP1Q86YF9 867 aaKnown RBP2.28□□□□□ -2.04
UBR1-209ENST00000569243 TDHQ8IZJ6 230 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 OR6T1Q8NGN1 323 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 OR13C5Q8NGS8 318 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 SNRNP27Q8WVK2 155 aaKnown RBP2.28□□□□□ -2.04
UBR1-209ENST00000569243 BPIFA2Q96DR5 249 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 ZBP1Q9H171 429 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 AMBNQ9NP70 447 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 UBE2TQ9NPD8 197 aaPredicted RBP2.28□□□□□ -2.04
UBR1-209ENST00000569243 VNN3Q9NY84 501 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 SLCO1C1Q9NYB5 712 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 CFDP1Q9UEE9 299 aaPredicted RBP2.28□□□□□ -2.04
UBR1-209ENST00000569243 Q9UF83 564 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 SWAP70Q9UH65 585 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 ANAPC5Q9UJX4 755 aa2.28□□□□□ -2.04
UBR1-209ENST00000569243 HBS1LQ9Y450 684 aaKnown RBP2.28□□□□□ -2.04
UBR1-209ENST00000569243 SLC30A4O14863 429 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 FIBPO43427 364 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 ACSL4O60488 711 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 SRPX2O60687 465 aaPredicted RBP2.27□□□□□ -2.05
UBR1-209ENST00000569243 DKC1O60832 514 aaKnown RBP eCLIP2.27□□□□□ -2.05
UBR1-209ENST00000569243 ZNF253O75346 499 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 PIGRP01833 764 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 TSPY3P0CV98 308 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 TSPY8P0CW00 308 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 LBPP18428 481 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 PPP2R1AP30153 589 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 KRT20P35900 424 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 TNFRSF4P43489 277 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 BRCC3P46736 316 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 FHITP49789 147 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 MEOX2P50222 304 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 ERVPABLB-1P60509 514 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 NUCB1Q02818 461 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 MFGE8Q08431 387 aaPredicted RBP2.27□□□□□ -2.05
UBR1-209ENST00000569243 ZNF444Q8N0Y2 327 aaPredicted RBP2.27□□□□□ -2.05
UBR1-209ENST00000569243 ZNRF1Q8ND25 227 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 SAP25Q8TEE9 199 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 GTSF1Q8WW33 167 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 CKAP2Q8WWK9 683 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 DNASE1L2Q92874 299 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 ESAMQ96AP7 390 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 NTNG2Q96CW9 530 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 RANBP9Q96S59 729 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 SERINC2Q96SA4 455 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 BAG1Q99933 345 aaPredicted RBP2.27□□□□□ -2.05
UBR1-209ENST00000569243 SH3GLB2Q9NR46 395 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.27□□□□□ -2.05
UBR1-209ENST00000569243 MED17Q9NVC6 651 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 TMOD3Q9NYL9 352 aa2.27□□□□□ -2.05
UBR1-209ENST00000569243 TEX48A0A1B0GUV7 120 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 GTPBP10A4D1E9 387 aaKnown RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 OR5H15A6NDH6 313 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 ANKDD1BA6NHY2 528 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 ZNF487B1APH4 448 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 IFIT3O14879 490 aaKnown RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 EIF5BO60841 1220 aaKnown RBP2.26□□□□□ -2.05
UBR1-209ENST00000569243 FHP07954 510 aa2.26□□□□□ -2.05
UBR1-209ENST00000569243 ZFYP08048 801 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms