RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 DFFBO76075 338 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 B3GAT3O94766 335 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 NMBRP28336 390 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CPOXP36551 454 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SSR2P43308 183 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 GDF10P55107 478 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SLC25A11Q02978 314 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CBFBQ13951 182 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 BTG3Q14201 252 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 STK11Q15831 433 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 FXNQ16595 210 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 UAP1L1Q3KQV9 507 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 RNASE10Q5GAN6 216 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 DDX53Q86TM3 631 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SERPINA11Q86U17 422 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 BRIX1Q8TDN6 353 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CORO2AQ92828 525 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CDADC1Q9BWV3 514 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SLC19A3Q9BZV2 496 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 GMEB2Q9UKD1 530 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SCML1Q9UN30 329 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 RNF212BA8MTL3 300 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 B4GALT5O43286 388 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF780AO75290 641 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 GNRH1P01148 92 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 GIMD1P0DJR0 217 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CLDN8P56748 225 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 C9orf64Q5T6V5 341 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 FAM46CQ5VWP2 391 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 C1orf94Q6P1W5 598 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SCIMPQ6UWF3 145 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PRSS42Q7Z5A4 293 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 KCTD20Q7Z5Y7 419 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF280BQ86YH2 543 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 OR5T1Q8NG75 326 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF778Q96MU6 729 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 BCL2L14Q9BZR8 327 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 NKX6-2Q9C056 277 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 MROH1Q8NDA8 1641 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 C17orf102A2RUQ5 167 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 E2F3O00716 465 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 UBL3O95164 117 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 TSPAN12O95859 305 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SHMT1P34896 483 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 IDH3GP51553 393 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 FCGRTP55899 365 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ERVK-21P61565 698 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF674Q2M3X9 581 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CGB2Q6NT52 195 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CEP68Q76N32 757 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 VASH1Q7L8A9 365 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 LDB1Q86U70 411 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ESX1Q8N693 406 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF565Q8N9K5 539 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 OR2T33Q8NG76 320 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 XAGE5Q8WWM1 108 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF587Q96SQ5 575 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 C12orf57Q99622 126 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SMAD5Q99717 465 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 BARD1Q99728 777 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SYT3Q9BQG1 590 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 URM1Q9BTM9 101 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 TMEM39BQ9GZU3 492 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SLC28A3Q9HAS3 691 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 RPS10P5Q9NQ39 176 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ABI2Q9NYB9 513 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 V9GYS6 101 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ATRNL1Q5VV63 1379 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 CXorf49A8MYA2 514 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 M0R129 80 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PIPP12273 146 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 GABRB3P28472 473 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 OXTRP30559 389 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ABRAXAS2Q15018 415 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 KCTD18Q6PI47 426 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 SMARCD3Q6STE5 483 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF574Q6ZN55 896 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 NUDT13Q86X67 352 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 STPG2Q8N412 459 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF709Q8N972 641 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 KCTD13Q8WZ19 329 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 NIFKQ9BYG3 293 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 DPEP3Q9H4B8 488 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 GBA2Q9HCG7 927 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 PTPRHQ9HD43 1115 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 EIF2B4Q9UI10 523 aaKnown RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 RPH3AQ9Y2J0 694 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-216ENST00000569240 GPR25O00155 361 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 OR7A17O14581 309 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 KIAA0355O15063 1070 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 BEST1O76090 585 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 AHSA1O95433 338 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 C1RP00736 705 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 AKAIN1P0CW23 69 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 ZNF823P16415 610 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 UQCRC2P22695 453 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 BMP8BP34820 402 aa6.85□□□□□ -1.31
CNOT1-216ENST00000569240 KCNQ1P51787 676 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms