RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 ATG4BQ9Y4P1 393 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 SHANK1Q9Y566 2161 aa11.5□□□□□ -0.57
FANCA-229ENST00000567988 BLACEA4D250 179 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 TMEM200CA6NKL6 621 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 J3QKU1 62 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 PSMD12O00232 456 aaPredicted RBP11.49□□□□□ -0.57
FANCA-229ENST00000567988 MANBAO00462 879 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 PROM1O43490 865 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 TYROBPO43914 113 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 MAN1A2O60476 641 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 SH3BGRLO75368 114 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 SUPT7LO94864 414 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 OR4F21O95013 312 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 ESRRBO95718 433 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 PDYNP01213 254 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 TUBBP07437 444 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 CREB1P16220 341 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 TPP2P29144 1249 aaPredicted RBP11.49□□□□□ -0.57
FANCA-229ENST00000567988 ETV4P43268 484 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 SSR2P43308 183 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 CCT5P48643 541 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 HTR6P50406 440 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 PKNOX1P55347 436 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 OR4D2P58180 307 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 TNFRSF17Q02223 184 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 ZNF33BQ06732 778 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 DDX39BQ13838 428 aaKnown RBP11.49□□□□□ -0.57
FANCA-229ENST00000567988 AP5B1Q2VPB7 878 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 MFSD4BQ5TF39 518 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 PRICKLE2Q7Z3G6 844 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 MYLK4Q86YV6 388 aaPredicted RBP11.49□□□□□ -0.57
FANCA-229ENST00000567988 LGI4Q8N135 537 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 SIRT6Q8N6T7 355 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 PTPMT1Q8WUK0 201 aaPredicted RBP11.49□□□□□ -0.57
FANCA-229ENST00000567988 HAS2Q92819 552 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 CCDC126Q96EE4 140 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 APOPT1Q96IL0 206 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 SERPINI1Q99574 410 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 LPAR4Q99677 370 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 PRTFDC1Q9NRG1 225 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 VTI1BQ9UEU0 232 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 ADAM29Q9UKF5 820 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 G3BP2Q9UN86 482 aaKnown RBP11.49□□□□□ -0.57
FANCA-229ENST00000567988 PLAAQ9Y263 795 aa11.49□□□□□ -0.57
FANCA-229ENST00000567988 HEMK1Q9Y5R4 338 aaPredicted RBP11.49□□□□□ -0.57
FANCA-229ENST00000567988 SCN2AQ99250 2005 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 A0A1W2PR48 441 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 CLEC18AA5D8T8 446 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 SYNDIG1LA6NDD5 238 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 COPEO14579 308 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 FGF17O60258 216 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 MLYCDO95822 493 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 MYL2P10916 166 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 HSD3B1P14060 373 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 HSD3B2P26439 372 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 TNFSF10P50591 281 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 FOXA1P55317 472 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 NAA20P61599 178 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 AP2B1P63010 937 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 SLAMF1Q13291 335 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 BTBD16Q32M84 506 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 PRR30Q53SZ7 412 aaPredicted RBP11.48□□□□□ -0.57
FANCA-229ENST00000567988 CLEC18BQ6UXF7 455 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 GPRIN3Q6ZVF9 776 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 NUDT13Q86X67 352 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 KIF2BQ8N4N8 673 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 CLEC18CQ8NCF0 446 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 ATP6V1E2Q96A05 226 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 MRPL1Q9BYD6 325 aaKnown RBP11.48□□□□□ -0.57
FANCA-229ENST00000567988 TRIM45Q9H8W5 580 aaPredicted RBP11.48□□□□□ -0.57
FANCA-229ENST00000567988 COPS7BQ9H9Q2 264 aaPredicted RBP11.48□□□□□ -0.57
FANCA-229ENST00000567988 ADAP2Q9NPF8 381 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 SIRT5Q9NXA8 310 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 MS4A12Q9NXJ0 267 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 PTGFRNQ9P2B2 879 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 NTNG1Q9Y2I2 539 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 CCL27Q9Y4X3 112 aa11.48□□□□□ -0.57
FANCA-229ENST00000567988 TLDC2A0PJX2 215 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 WASHC1A8K0Z3 465 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 NPIPB8E9PQR5 432 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 CLDN4O14493 209 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 CDK2AP1O14519 115 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 PRKRAO75569 313 aaKnown RBP11.47□□□□□ -0.57
FANCA-229ENST00000567988 DDAH2O95865 285 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 WDPCPO95876 746 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 IGKV3-11P04433 115 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 ENO1P06733 434 aaKnown RBP11.47□□□□□ -0.57
FANCA-229ENST00000567988 FAM58BPP0C7Q3 252 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 CPA3P15088 417 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 CHN1P15882 459 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 ARRB2P32121 409 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 NAGLUP54802 743 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 MLLT10P55197 1068 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 PHEXP78562 749 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 IFT88Q13099 833 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 RCN2Q14257 317 aa11.47□□□□□ -0.57
FANCA-229ENST00000567988 ELAVL1Q15717 326 aaKnown RBP11.47□□□□□ -0.57
FANCA-229ENST00000567988 ACER2Q5QJU3 275 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms