RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 KCTD14Q9BQ13 255 aaPredicted RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TUBA1CQ9BQE3 449 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TMEM79Q9BSE2 394 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 COQ10BQ9H8M1 238 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 RDH14Q9HBH5 336 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 HEBP1Q9NRV9 189 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 AGPAT4Q9NRZ5 378 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ASIC5Q9NY37 505 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 GDE1Q9NZC3 331 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 RSL24D1Q9UHA3 163 aaKnown RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CIDEBQ9UHD4 219 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ANAPC2Q9UJX6 822 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 PCTPQ9UKL6 214 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 EIF3LQ9Y262 564 aaKnown RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 DHRS7Q9Y394 339 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 AP1M2Q9Y6Q5 423 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 NBEAQ8NFP9 2946 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 A0A0D9SEW6 157 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 RNF103-CHMP3A0A140T963 221 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ATP6AP2A0A1C7CYW4 349 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 PABPN1LA6NDY0 278 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TRIM64A6NGJ6 449 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TRIM64CA6NLI5 447 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 F5H697 171 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 H3BNH8 94 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 M0QYG6 137 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 FXYD1O00168 92 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 QSOX1O00391 747 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 E2F3O00716 465 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 NME4O00746 187 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MGST3O14880 152 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 COCHO43405 550 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ATP6AP2O75787 350 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 DNAJB5O75953 348 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 RASAL1O95294 804 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 PGLSO95336 258 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SIX3O95343 332 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TSPAN12O95859 305 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TBX18O95935 607 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 IL6P05231 212 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 HMBSP08397 361 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 F7P08709 466 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 IL1RNP18510 177 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ATF6P18850 670 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TCN1P20061 433 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CAPN3P20807 821 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CORO1AP31146 461 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 AKT1P31749 480 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MAPK9P45984 424 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ALDH3B2P48448 385 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SLC11A1P49279 550 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CDK9P50750 372 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CCT8P50990 548 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MAPK10P53779 464 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ARPP19P56211 112 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 NUP107P57740 925 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 RHOAP61586 193 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ARF5P84085 180 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MYBPC1Q00872 1141 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TIAL1Q01085 375 aaKnown RBP eCLIP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MERTKQ12866 999 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 RALGDSQ12967 914 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 BIRC2Q13490 618 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CDH18Q13634 790 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SEMA3AQ14563 771 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ZNF267Q14586 743 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CYTH1Q15438 398 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TGFBIQ15582 683 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 TSNQ15631 228 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ATP6AP1Q15904 470 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 RBBP7Q16576 425 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 NRF1Q16656 503 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 CYP51A1Q16850 503 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 VPS26BQ4G0F5 336 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 NADK2Q4G0N4 442 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 FAM98BQ52LJ0 330 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 C6orf52Q5T4I8 152 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SDHAF4Q5VUM1 108 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 PTRHD1Q6GMV3 140 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SULT1C3Q6IMI6 304 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 PARM1Q6UWI2 310 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ABRAXAS1Q6UWZ7 409 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MACC1Q6ZN28 852 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 MSANTD1Q6ZTZ1 278 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SNX20Q7Z614 316 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 GRASPQ7Z6J2 395 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 PATL1Q86TB9 770 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 LDB1Q86U70 411 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 SATL1Q86VE3 508 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 WDR5BQ86VZ2 330 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 DENND1CQ8IV53 801 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 RNF168Q8IYW5 571 aaPredicted RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 GALNT4Q8N4A0 578 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 RNF148Q8N7C7 305 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 BOLLQ8N9W6 283 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 FNDC5Q8NAU1 212 aa5.08□□□□□ -1.6
CAPN3-217ENST00000567817 FAM98AQ8NCA5 519 aaKnown RBP5.08□□□□□ -1.6
CAPN3-217ENST00000567817 ZNF461Q8TAF7 563 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms