RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 CYSRT1A8MQ03 144 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 A8MXK9 166 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 TCP10L2B9ZVM9 353 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 INPP4BO15327 924 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 CPNE6O95741 557 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 IGHG1P01857 330 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 KRT5P13647 590 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 ANPEPP15144 967 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 GATA1P15976 413 aaPredicted RBP3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 CYP3A5P20815 502 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 GPX3P22352 226 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 LMO4P61968 165 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 GABPAQ06546 454 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 LCP2Q13094 533 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 GCKRQ14397 625 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 SIX1Q15475 284 aaPredicted RBP3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 CCL14Q16627 93 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 FBXL22Q6P050 247 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 CNTN4Q8IWV2 1026 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 FAM9BQ8IZU0 186 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 THEM5Q8N1Q8 247 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 LPCAT1Q8NF37 534 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 SPPL2AQ8TCT8 520 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 HAS2Q92819 552 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 CABS1Q96KC9 395 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 GUCD1Q96NT3 240 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 ALKBH3Q96Q83 286 aaPredicted RBP3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 PRAM1Q96QH2 718 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 TAAR6Q96RI8 345 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 UBAC1Q9BSL1 405 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 PLEKHA3Q9HB20 300 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 SH3GLB1Q9Y371 365 aa3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 COL5A2P05997 1499 aaPredicted RBP3.85□□□□□ -1.79
SHCBP1-206ENST00000567698 SH3PXD2BA1X283 911 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 OR5H15A6NDH6 313 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 FRAT2O75474 233 aaPredicted RBP3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 CRCPO75575 148 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 IGHG3P01860 377 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 CHRNGP07510 517 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 FHP07954 510 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 SHC1P29353 583 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 CTNNB1P35222 781 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 ZFP36L2P47974 494 aaKnown RBP3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 GSK3BP49841 420 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 ITPK1Q13572 414 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 POM121L1PQ3SYA9 428 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 RFTN2Q52LD8 501 aaPredicted RBP3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 TCTEX1D4Q5JR98 221 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF772Q68DY9 489 aaPredicted RBP3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 CD164L2Q6UWJ8 174 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 STXBP4Q6ZWJ1 553 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 MCM10Q7L590 875 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 RPAINQ86UA6 219 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 ITIH5Q86UX2 942 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 SLC47A2Q86VL8 602 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 SERPINA12Q8IW75 414 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 ZNF444Q8N0Y2 327 aaPredicted RBP3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 ELMOD1Q8N336 334 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 C10orf53Q8N6V4 93 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 SIDT2Q8NBJ9 832 aaKnown RBP3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 OR6F1Q8NGZ6 308 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 PRCCQ92733 491 aaPredicted RBP3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 KRT35Q92764 455 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 ULK4Q96C45 1275 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 C5orf30Q96GV9 206 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 GAL3ST4Q96RP7 486 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 S1PR3Q99500 378 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 OCR1Q9BZK8 76 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 WDR41Q9HAD4 459 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 MED17Q9NVC6 651 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 TECRQ9NZ01 308 aaKnown RBP3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 TRPC4Q9UBN4 977 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 MAD2L2Q9UI95 211 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 FBXW2Q9UKT8 454 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 KCNK6Q9Y257 313 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 SALL1Q9NSC2 1324 aa3.84□□□□□ -1.79
SHCBP1-206ENST00000567698 IQCMA0A1B0GVH7 501 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 CACNB4O00305 520 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 PSMD3O43242 534 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 POP4O95707 220 aaKnown RBP3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 IGHV3-13P01766 116 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 HCKP08631 526 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 CD1DP15813 335 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 IL4RP24394 825 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 SMSP52788 366 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 RPS27AP62979 156 aaKnown RBP3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 ACTN3Q08043 901 aaPredicted RBP3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 RBBP4Q09028 425 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 RAPSNQ13702 412 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 PDE7AQ13946 482 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 GIT2Q14161 759 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 OR1C1Q15619 314 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 WSCD2Q2TBF2 565 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 SNRNP48Q6IEG0 339 aaKnown RBP3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 SNX32Q86XE0 403 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 STHQ8IWL8 128 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 LMNTD2Q8IXW0 634 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 NPRL2Q8WTW4 380 aa3.83□□□□□ -1.8
SHCBP1-206ENST00000567698 MRPL53Q96EL3 112 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms