RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SAYSD1Q9NPB0 183 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 NUDT4Q9NZJ9 180 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 VTI1BQ9UEU0 232 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 ASB1Q9Y576 335 aa17.32■□□□□ 0.36
LINC01238-205ENST00000567549 A0A0G2JN53 185 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 A0A1B0GTH9 108 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 SYCE1LA8MT33 242 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 HS6ST1O60243 411 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 CD1DP15813 335 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 TLX1P31314 330 aaPredicted RBP17.31■□□□□ 0.36
LINC01238-205ENST00000567549 STX2P32856 288 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 PTGER1P34995 402 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 ST13P50502 369 aaKnown RBP17.31■□□□□ 0.36
LINC01238-205ENST00000567549 DOC2AQ14183 400 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 MED27Q6P2C8 311 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 RTL4Q6ZR62 310 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 C3orf62Q6ZUJ4 267 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 CD163Q86VB7 1156 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 ZNF227Q86WZ6 799 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 CTAGE3PQ8IX95 158 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 CEP112Q8N8E3 955 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 GOLM1Q8NBJ4 401 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 RND1Q92730 232 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 CMTM7Q96FZ5 175 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 TMEM79Q9BSE2 394 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 ALOXE3Q9BYJ1 711 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 RAB17Q9H0T7 212 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 KCMF1Q9P0J7 381 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 OPTCQ9UBM4 332 aa17.31■□□□□ 0.36
LINC01238-205ENST00000567549 PTBP2Q9UKA9 531 aaKnown RBP17.31■□□□□ 0.36
LINC01238-205ENST00000567549 MTO1Q9Y2Z2 717 aaKnown RBP17.31■□□□□ 0.36
LINC01238-205ENST00000567549 OR14I1A6ND48 311 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 C4orf51C9J302 202 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 CYR61O00622 381 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 OR2J2O76002 312 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 CERS1P27544 350 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 CRABP2P29373 138 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 SSTR1P30872 391 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 CHRNB4P30926 498 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 CASP2P42575 452 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 MSH2P43246 934 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 ARFIP1P53367 373 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 HSF1Q00613 529 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 CHIT1Q13231 466 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 DND1Q8IYX4 353 aaKnown RBP17.3■□□□□ 0.36
LINC01238-205ENST00000567549 MNS1Q8NEH6 495 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 REPS1Q96D71 796 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 FAM173AQ9BQD7 235 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 PELOQ9BRX2 385 aaKnown RBP17.3■□□□□ 0.36
LINC01238-205ENST00000567549 TRIM8Q9BZR9 551 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 CD244Q9BZW8 370 aa17.3■□□□□ 0.36
LINC01238-205ENST00000567549 APCP25054 2843 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 TCRBV9S1A1TA0A576 114 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 CTAGE15A4D2H0 777 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 FAM159BA6NKW6 160 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 FIGNL2A6NMB9 653 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 FAM47E-STBD1D6RA91 191 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 BCKDKO14874 412 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 TAPBPO15533 448 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 PHGDHO43175 533 aaKnown RBP17.29■□□□□ 0.36
LINC01238-205ENST00000567549 P04436 131 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 SSR2P43308 183 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 GPR143P51810 404 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 RAP1GDS1P52306 607 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 PPIAP62937 165 aaKnown RBP17.29■□□□□ 0.36
LINC01238-205ENST00000567549 ZKSCAN8Q15776 578 aaPredicted RBP17.29■□□□□ 0.36
LINC01238-205ENST00000567549 C18orf21Q32NC0 220 aaPredicted RBP17.29■□□□□ 0.36
LINC01238-205ENST00000567549 CMPK2Q5EBM0 449 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 RNFT1Q5M7Z0 435 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 IL20RBQ6UXL0 311 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 CLNKQ7Z7G1 428 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 CTAGE6Q86UF2 777 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 SLC22A8Q8TCC7 542 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 UBXN10Q96LJ8 280 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 RASL10BQ96S79 203 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 OR8D2Q9GZM6 311 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 AICDAQ9GZX7 198 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 CAB39LQ9H9S4 337 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 PLSCR2Q9NRY7 297 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 SACM1LQ9NTJ5 587 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 PHF11Q9UIL8 331 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 ANGPTL3Q9Y5C1 460 aa17.29■□□□□ 0.36
LINC01238-205ENST00000567549 C17orf105B2RV13 164 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 SUPT3HB4E1H0 165 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 TP73O15350 636 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 SUPT3HO75486 399 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 WISP3O95389 354 aaPredicted RBP17.28■□□□□ 0.36
LINC01238-205ENST00000567549 LTA4HP09960 611 aaKnown RBP17.28■□□□□ 0.36
LINC01238-205ENST00000567549 PCNAP12004 261 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 EPB42P16452 691 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 HIST1H1TP22492 207 aaPredicted RBP17.28■□□□□ 0.36
LINC01238-205ENST00000567549 CPN2P22792 545 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 GPR85P60893 370 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 PLIN5Q00G26 463 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 SLMAPQ14BN4 828 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 KLC3Q6P597 504 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 MDGA2Q7Z553 956 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 ACOT4Q8N9L9 421 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 OR2M7Q8NG81 312 aa17.28■□□□□ 0.36
LINC01238-205ENST00000567549 EXT2Q93063 718 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms