RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 APOBEC4Q8WW27 367 aaKnown RBP11.46□□□□□ -0.57
SF3B3-208ENST00000567250 PTCHD1Q96NR3 888 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 MAPKAP1Q9BPZ7 522 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 SORBS1Q9BX66 1292 aaKnown RBP11.46□□□□□ -0.57
SF3B3-208ENST00000567250 TNFRSF12AQ9NP84 129 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 PRTFDC1Q9NRG1 225 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 LANCL2Q9NS86 450 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 INTS9Q9NV88 658 aaKnown RBP11.46□□□□□ -0.57
SF3B3-208ENST00000567250 RIC8BQ9NVN3 520 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 THAP1Q9NVV9 213 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 P4HTMQ9NXG6 502 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 MCM8Q9UJA3 840 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 G3BP2Q9UN86 482 aaKnown RBP11.46□□□□□ -0.57
SF3B3-208ENST00000567250 SCN2AQ99250 2005 aa11.46□□□□□ -0.57
SF3B3-208ENST00000567250 LOC102723996A0A087X1L8 192 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 GNG14A0A1W2PPG7 69 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 A0A1W2PQ72 361 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 TMEM233B4DJY2 109 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 NPIPB8E9PQR5 432 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 PIP5K1BO14986 540 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 PCDH7O60245 1069 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 KLHL41O60662 606 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 EEDO75530 441 aaKnown RBP11.45□□□□□ -0.58
SF3B3-208ENST00000567250 SKAP2O75563 359 aaPredicted RBP11.45□□□□□ -0.58
SF3B3-208ENST00000567250 LYPLA1O75608 230 aaPredicted RBP11.45□□□□□ -0.58
SF3B3-208ENST00000567250 HPP00738 406 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 KLK1P06870 262 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 NR2F6P10588 404 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 CHN1P15882 459 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 TPP2P29144 1249 aaPredicted RBP11.45□□□□□ -0.58
SF3B3-208ENST00000567250 TIA1P31483 386 aaKnown RBP eCLIP11.45□□□□□ -0.58
SF3B3-208ENST00000567250 RPL14P50914 215 aaKnown RBP11.45□□□□□ -0.58
SF3B3-208ENST00000567250 FOXL2P58012 376 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 TBL3Q12788 808 aaKnown RBP11.45□□□□□ -0.58
SF3B3-208ENST00000567250 SLC13A2Q13183 592 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 NSDHLQ15738 373 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 DEFB109BQ30KR1 87 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 ATP1A1-AS1Q5TC04 95 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 OR52E8Q6IFG1 317 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 GALNT18Q6P9A2 607 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 TMEM205Q6UW68 189 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 LAPTM4BQ86VI4 370 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 SCUBE1Q8IWY4 988 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 ZNF781Q8N8C0 355 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 PLPP5Q8NEB5 264 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 FAM76AQ8TAV0 307 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 PPP3R2Q96LZ3 170 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 CSF3RQ99062 836 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 ARHGAP9Q9BRR9 750 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 FAIM2Q9BWQ8 316 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 MANSC1Q9H8J5 431 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 C1orf109Q9NX04 203 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 SIRT5Q9NXA8 310 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 ZDHHC2Q9UIJ5 367 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 HAO1Q9UJM8 370 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 TMED5Q9Y3A6 229 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 NBEAQ8NFP9 2946 aa11.45□□□□□ -0.58
SF3B3-208ENST00000567250 LAMA5O15230 3695 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 NSG1A0A0A6YYJ2 146 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 ARGFXA6NJG6 315 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 SLCO1B7G3V0H7 640 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 ERVH48-1M5A8F1 160 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 CYR61O00622 381 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 SOCS6O14544 535 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 ITM2AO43736 263 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 TMPRSS11DO60235 418 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 SNNO75324 88 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 FURINP09958 794 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 MAPK1P28482 360 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 ARRB2P32121 409 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 HK2P52789 917 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 HNRNPH2P55795 449 aaKnown RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 EEF1A2Q05639 463 aaKnown RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 ZNF763Q0D2J5 394 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 STX4Q12846 297 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 MAD2L1Q13257 205 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 BIKQ13323 160 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 SERTAD2Q14140 314 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 ATP6AP1LQ52LC2 224 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 DCAF10Q5QP82 559 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 IRAK1BP1Q5VVH5 260 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 FAAH2Q6GMR7 532 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 MRM1Q6IN84 353 aaKnown RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 SCIMPQ6UWF3 145 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 KIRREL2Q6UWL6 708 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 NDUFAF7Q7L592 441 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 CPEB2Q7Z5Q1 589 aaKnown RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 APLFQ8IW19 511 aaPredicted RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 OR11G2Q8NGC1 345 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 CHTF18Q8WVB6 975 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 TANKQ92844 425 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 C19orf60Q96EN9 201 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 APIPQ96GX9 242 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 CRELD1Q96HD1 420 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 SORT1Q99523 831 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 LPAR4Q99677 370 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 PELOQ9BRX2 385 aaKnown RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 TUBB6Q9BUF5 446 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 RPF2Q9H7B2 306 aaKnown RBP11.44□□□□□ -0.58
SF3B3-208ENST00000567250 LRTM1Q9HBL6 345 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms