RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 GPALPP1Q8IXQ4 340 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 OR14A16Q8NHC5 309 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 RHEBL1Q8TAI7 183 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 KCMF1Q9P0J7 381 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 VTI1BQ9UEU0 232 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 ADGRE2Q9UHX3 823 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 GTF3C1Q12789 2109 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 PCNAP12004 261 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 ABOP16442 354 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 AGAP20933 346 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 ATP5A1P25705 553 aaKnown RBP18.78■□□□□ 0.6
CLN6-207ENST00000566347 MEOX1P50221 254 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 AP5B1Q2VPB7 878 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 C8orf74Q6P047 294 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 ZNF793Q6ZN11 406 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 ACOT4Q8N9L9 421 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 MORN4Q8NDC4 146 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 OR7G3Q8NG95 312 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 NXNL1Q96CM4 212 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 CMTM7Q96FZ5 175 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 ALOXE3Q9BYJ1 711 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 CHST11Q9NPF2 352 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 TIMMDC1Q9NPL8 285 aa18.78■□□□□ 0.6
CLN6-207ENST00000566347 TFECO14948 347 aaPredicted RBP18.77■□□□□ 0.6
CLN6-207ENST00000566347 SCELO95171 688 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 HIST1H1TP22492 207 aaPredicted RBP18.77■□□□□ 0.6
CLN6-207ENST00000566347 SSR2P43308 183 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 RNFT1Q5M7Z0 435 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 MROH9Q5TGP6 573 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 GRHL2Q6ISB3 625 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 HSDL2Q6YN16 418 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 CEP128Q6ZU80 1094 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 SULF2Q8IWU5 870 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 CENPLQ8N0S6 344 aaPredicted RBP18.77■□□□□ 0.6
CLN6-207ENST00000566347 EID3Q8N140 333 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 MAPKAP1Q9BPZ7 522 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 CENPKQ9BS16 269 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 ERVK-11Q9UQG0 969 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 MEMO1Q9Y316 297 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 ANGPTL3Q9Y5C1 460 aa18.77■□□□□ 0.6
CLN6-207ENST00000566347 NCOA6Q14686 2063 aaPredicted RBP18.77■□□□□ 0.59
CLN6-207ENST00000566347 ESYT3A0FGR9 886 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 A8MVJ9 347 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 PEX1O43933 1283 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 TGFB1P01137 390 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 TUBB4AP04350 444 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 C2P06681 752 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 MTHFD2P13995 350 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 HTR1EP28566 365 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 PHBP35232 272 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 ADORA2A-AS1P86434 159 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 SLC7A5Q01650 507 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 NAA30Q147X3 362 aaPredicted RBP18.76■□□□□ 0.59
CLN6-207ENST00000566347 ACAP2Q15057 778 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 ZNF630Q2M218 657 aaPredicted RBP18.76■□□□□ 0.59
CLN6-207ENST00000566347 KHDRBS2Q5VWX1 349 aaKnown RBP18.76■□□□□ 0.59
CLN6-207ENST00000566347 KLC3Q6P597 504 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 TEX9Q8N6V9 391 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 PTPMT1Q8WUK0 201 aaPredicted RBP18.76■□□□□ 0.59
CLN6-207ENST00000566347 KCTD4Q8WVF5 259 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 ASB15Q8WXK1 588 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 SNX15Q9NRS6 342 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 ZDHHC18Q9NUE0 388 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 HPF1Q9NWY4 346 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 MYOTQ9UBF9 498 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 TSC22D4Q9Y3Q8 395 aa18.76■□□□□ 0.59
CLN6-207ENST00000566347 ABCA12Q86UK0 2595 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 RTCAO00442 366 aaKnown RBP18.75■□□□□ 0.59
CLN6-207ENST00000566347 PRRG2O14669 202 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 PRKNO60260 465 aaPredicted RBP18.75■□□□□ 0.59
CLN6-207ENST00000566347 OR2J2O76002 312 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 GFAPP14136 432 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 TNNI3P19429 210 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 CPN2P22792 545 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 PIK3CBP42338 1070 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 ALDH18A1P54886 795 aaKnown RBP18.75■□□□□ 0.59
CLN6-207ENST00000566347 IRF9Q00978 393 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 SETDB1Q15047 1291 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 DEPDC1Q5TB30 811 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 LIPJQ5W064 366 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 OR4C11Q6IEV9 310 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 MDGA2Q7Z553 956 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 ZFP62Q8NB50 900 aaPredicted RBP18.75■□□□□ 0.59
CLN6-207ENST00000566347 OR8K3Q8NH51 312 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 C16orf52Q8NHV5 167 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 RGMAQ96B86 450 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 MRRFQ96E11 262 aaKnown RBP18.75■□□□□ 0.59
CLN6-207ENST00000566347 LRRC1Q9BTT6 524 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 OR8D2Q9GZM6 311 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 MS4A12Q9NXJ0 267 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 PCDHGA11Q9Y5H2 935 aa18.75■□□□□ 0.59
CLN6-207ENST00000566347 TMEM200CA6NKL6 621 aa18.74■□□□□ 0.59
CLN6-207ENST00000566347 C17orf105B2RV13 164 aa18.74■□□□□ 0.59
CLN6-207ENST00000566347 UGDHO60701 494 aa18.74■□□□□ 0.59
CLN6-207ENST00000566347 LDB3O75112 727 aa18.74■□□□□ 0.59
CLN6-207ENST00000566347 SH3BGRLO75368 114 aa18.74■□□□□ 0.59
CLN6-207ENST00000566347 KLHL2O95198 593 aa18.74■□□□□ 0.59
CLN6-207ENST00000566347 COX7A2P14406 83 aa18.74■□□□□ 0.59
CLN6-207ENST00000566347 GRNP28799 593 aaKnown RBP18.74■□□□□ 0.59
CLN6-207ENST00000566347 PIK3CGP48736 1102 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms