RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 GCN1Q92616 2671 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 BAHCC1Q9P281 2608 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 MANBAO00462 879 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 CLDN4O14493 209 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 TRIM13O60858 407 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 ESRRBO95718 433 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 PDYNP01213 254 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 ENO1P06733 434 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 HIST1H1TP22492 207 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 BSGP35613 385 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 TSFMP43897 325 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 ARFIP1P53367 373 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 LIM2P55344 173 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 OR4D2P58180 307 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 EXT1Q16394 746 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 BTBD16Q32M84 506 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 SFT2D3Q587I9 215 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 TCHHL1Q5QJ38 904 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 SLC6A19Q695T7 634 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 PLAG1Q6DJT9 500 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 PAPD4Q6PIY7 484 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 M1APQ8TC57 530 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 METTL6Q8TCB7 284 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 BRIX1Q8TDN6 353 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 SELENOMQ8WWX9 145 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 PSMF1Q92530 271 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 SERPINI1Q99574 410 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 ZNF717Q9BY31 904 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 LYRM4Q9HD34 91 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 MID1IP1Q9NPA3 183 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 SLAMF7Q9NQ25 335 aa12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 MRPS33Q9Y291 106 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-210ENST00000565966 TCRBV16S1A1N1A0A5B0 115 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 TTLL8A6PVC2 850 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 KRT6AP02538 564 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 KRT6BP04259 564 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 CELA2AP08217 269 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 MYZAPP0CAP1 466 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 ITGAMP11215 1152 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 H2AFXP16104 143 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 MAOAP21397 527 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 HMOX2P30519 316 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 KRT6CP48668 564 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 CD97P48960 835 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 HTR6P50406 440 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 HNRNPFP52597 415 aaKnown RBP12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 HSD17B7P56937 341 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 ASPHQ12797 758 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 MFAP5Q13361 173 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 PLEKHN1Q494U1 663 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 ZNF595Q8IYB9 648 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 SIRT6Q8N6T7 355 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 FAM47BQ8NA70 645 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 TMEM52Q8NDY8 209 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 KCNA7Q96RP8 456 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 CSF3RQ99062 836 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 MAPKAP1Q9BPZ7 522 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 TRIM4Q9C037 500 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 DDX31Q9H8H2 851 aaKnown RBP12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 BRF2Q9HAW0 419 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 TMBIM4Q9HC24 238 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 TNFRSF12AQ9NP84 129 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 NECTIN3Q9NQS3 549 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 PRTFDC1Q9NRG1 225 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 PTGFRNQ9P2B2 879 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 B3GNT3Q9Y2A9 372 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 TIMM22Q9Y584 194 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 SPACA6W5XKT8 324 aa12.97□□□□□ -0.33
HERPUD1-210ENST00000565966 SVILO95425 2214 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 IGKV3D-11A0A0A0MRZ8 115 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 H3BQF6 201 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 CYR61O00622 381 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 EEDO75530 441 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 SORBS2O94875 1100 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 SEMA3DO95025 777 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 BPGMP07738 259 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 UQCRHP07919 91 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 HSD3B1P14060 373 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 HSD3B2P26439 372 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 SOX11P35716 441 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 MLLT10P55197 1068 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 FOXA1P55317 472 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 SLC26A5P58743 744 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 SLAMF1Q13291 335 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 MPP2Q14168 576 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 ESPL1Q14674 2120 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 LINC00696Q6ZRV3 163 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 Q6ZS92 163 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 ZCCHC7Q8N3Z6 543 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 AMER2Q8N7J2 671 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 Q8NA96 180 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 DNAJB14Q8TBM8 379 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 CNDP1Q96KN2 507 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 HBEGFQ99075 208 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 TRMOQ9BU70 441 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 MRPL1Q9BYD6 325 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 SHCBP1LQ9BZQ2 653 aa12.96□□□□□ -0.33
HERPUD1-210ENST00000565966 STMN4Q9H169 189 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms