RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 CA5BP1Q8WTZ4 195 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 PTPMT1Q8WUK0 201 aaPredicted RBP5.97□□□□□ -1.45
TCF4-228ENST00000565393 KCTD4Q8WVF5 259 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 ATP6V1E2Q96A05 226 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 RGMAQ96B86 450 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 PPWD1Q96BP3 646 aaKnown RBP5.97□□□□□ -1.45
TCF4-228ENST00000565393 MTFMTQ96DP5 389 aaKnown RBP5.97□□□□□ -1.45
TCF4-228ENST00000565393 WDR34Q96EX3 536 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 CMTM7Q96FZ5 175 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 DGAT2Q96PD7 388 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 PHF12Q96QT6 1004 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 MTERF1Q99551 399 aaKnown RBP5.97□□□□□ -1.45
TCF4-228ENST00000565393 MAPKAP1Q9BPZ7 522 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 CENPKQ9BS16 269 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 VPS11Q9H270 941 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 OR51B5Q9H339 312 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 ACTR8Q9H981 624 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 LYRM4Q9HD34 91 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 ADAP2Q9NPF8 381 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 COQ3Q9NZJ6 369 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 NUDT4Q9NZJ9 180 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 MYOTQ9UBF9 498 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 VTI1BQ9UEU0 232 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 ADGRE2Q9UHX3 823 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 PPT2Q9UMR5 302 aa5.97□□□□□ -1.45
TCF4-228ENST00000565393 A0A096LPK6 155 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 IQANK1A0A1B0GTG1 560 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 FAM166BA8MTA8 275 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 E9PLN8 166 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 G3V3Y1 287 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 TGFBR3LH3BV60 316 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 PRKNO60260 465 aaPredicted RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 KERAO60938 352 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 URI1O94763 535 aaPredicted RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 OR6B1O95007 311 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 TBX6O95947 436 aaPredicted RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 P04436 131 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 C2P06681 752 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 SLC35E2BP0CK96 405 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 COX7A2P14406 83 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 EPORP19235 508 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 AGAP20933 346 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 HIST1H1TP22492 207 aaPredicted RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 TNFRSF8P28908 595 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 SERPINB1P30740 379 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 PTGER1P34995 402 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 PHBP35232 272 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 SOX3P41225 446 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 CASP2P42575 452 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 GPR143P51810 404 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 NEK2P51955 445 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 RNF4P78317 190 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 PHEXP78562 749 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 IRF9Q00978 393 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 GUCY2DQ02846 1103 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 BIKQ13323 160 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 ACAP2Q15057 778 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 CPSF6Q16630 551 aaKnown RBP eCLIP5.96□□□□□ -1.46
TCF4-228ENST00000565393 GXYLT1Q4G148 440 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 DEPDC1Q5TB30 811 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 TTC19Q6DKK2 380 aaPredicted RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 TMEM211Q6ICI0 200 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 OPN5Q6U736 354 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 ZDHHC24Q6UX98 284 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 FAM47EQ6ZV65 393 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 GPR180Q86V85 440 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 TICAM1Q8IUC6 712 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 SIAH3Q8IW03 269 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 GPALPP1Q8IXQ4 340 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 LAS2Q8IYD9 372 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 ARMC10Q8N2F6 343 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 RNF175Q8N4F7 328 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 ZNF321PQ8N8H1 164 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 PDPRQ8NCN5 879 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 OR10Q1Q8NGQ4 319 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 C16orf52Q8NHV5 167 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 HUS1BQ8NHY5 278 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 FAM57AQ8TBR7 257 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 SLC2A12Q8TD20 617 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 DOK4Q8TEW6 326 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 IFT81Q8WYA0 676 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 ZNF592Q92610 1267 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 ANKRD9Q96BM1 317 aaPredicted RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 SDCCAG3Q96C92 435 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 REPS1Q96D71 796 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 SENP5Q96HI0 755 aaPredicted RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 SCYL1Q96KG9 808 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 RASL10BQ96S79 203 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 CSF3RQ99062 836 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 VKORC1Q9BQB6 163 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 LRRC1Q9BTT6 524 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 SORBS1Q9BX66 1292 aaKnown RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 MS4A8Q9BY19 250 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 LDAHQ9H6V9 325 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 RPF2Q9H7B2 306 aaKnown RBP5.96□□□□□ -1.46
TCF4-228ENST00000565393 IPPKQ9H8X2 491 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 IGSF5Q9NSI5 407 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 MS4A12Q9NXJ0 267 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 ALKBH4Q9NXW9 302 aa5.96□□□□□ -1.46
TCF4-228ENST00000565393 CPSF2Q9P2I0 782 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms