RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-211ENST00000564815 IGHG3P01860 377 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 CD99P14209 185 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 GABRA1P14867 456 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 PPP2R1BP30154 601 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 HNRNPH1P31943 449 aaKnown RBP13.18□□□□□ -0.3
COMMD4-211ENST00000564815 SOX3P41225 446 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 KCNC1P48547 511 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 PGGT1BP53609 377 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 LIM2P55344 173 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 SLC25A35Q3KQZ1 300 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 ABHD17CQ6PCB6 329 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 C16orf47Q6ZP98 133 aaPredicted RBP13.18□□□□□ -0.3
COMMD4-211ENST00000564815 TRILQ7L0X0 811 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 CLNKQ7Z7G1 428 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 RHBDF1Q96CC6 855 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 QRFPRQ96P65 431 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 KCNC2Q96PR1 638 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 LIN28AQ9H9Z2 209 aaKnown RBP13.18□□□□□ -0.3
COMMD4-211ENST00000564815 POPDC3Q9HBV1 291 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 LYRM4Q9HD34 91 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 ZNF407Q9C0G0 2248 aa13.18□□□□□ -0.3
COMMD4-211ENST00000564815 ATP6AP2A0A1C7CYW4 349 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 FAM221AA4D161 298 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 CTAGE15A4D2H0 777 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 C17orf105B2RV13 164 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 CYR61O00622 381 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 AQP7O14520 342 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 PRKNO60260 465 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 HCN1O60741 890 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 ATP6AP2O75787 350 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 KRT38O76015 456 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 GLSO94925 669 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 DNAJA1P31689 397 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 GDF5P43026 501 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 HK2P52789 917 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 TAS2R39P59534 338 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 RNF4P78317 190 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 HYAL4Q2M3T9 481 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 ADPRMQ3LIE5 342 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 CDKL4Q5MAI5 379 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 SLC22A10Q63ZE4 541 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 STEAP4Q687X5 459 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 TRMT10BQ6PF06 316 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 CHSY3Q70JA7 882 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 CTAGE6Q86UF2 777 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 ZC3HC1Q86WB0 502 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 GPSM1Q86YR5 675 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 TMEM251Q8N6I4 163 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 SLCO2A1Q92959 643 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 NINJ1Q92982 152 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 UBE2E3Q969T4 207 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 PTCD3Q96EY7 689 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 TSPAN17Q96FV3 270 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 RBM18Q96H35 190 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 SCYL1Q96KG9 808 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 TBCDQ9BTW9 1192 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 EFCAB11Q9BUY7 163 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 AICDAQ9GZX7 198 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 DDX47Q9H0S4 455 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 DNAJC11Q9NVH1 559 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 DNAJB12Q9NXW2 375 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 WWOXQ9NZC7 414 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 SLC17A6Q9P2U8 582 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 IKZF3Q9UKT9 509 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 TEX264Q9Y6I9 313 aa13.17□□□□□ -0.3
COMMD4-211ENST00000564815 PHF3Q92576 2039 aaKnown RBP13.17□□□□□ -0.3
COMMD4-211ENST00000564815 CSMD2Q7Z408 3487 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 TRGV5A0A0B4J1U4 118 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 PINLYPA6NC86 204 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 NCF1BA6NI72 391 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 TMEM200CA6NKL6 621 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 NCF1CA8MVU1 366 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 C4orf51C9J302 202 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 G3V3Y1 287 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 STK16O75716 305 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 S100BP04271 92 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 GLI4P10075 376 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 NCF1P14598 390 aaPredicted RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 SLC6A12P48065 614 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 HNRNPFP52597 415 aaKnown RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 PPP2R2AP63151 447 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 TGFBIQ15582 683 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 TSNQ15631 228 aaKnown RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 MPEG1Q2M385 716 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 AP5B1Q2VPB7 878 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 SULT1C3Q6IMI6 304 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 ARSKQ6UWY0 536 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 DND1Q8IYX4 353 aaKnown RBP13.16□□□□□ -0.3
COMMD4-211ENST00000564815 RPRMLQ8N4K4 120 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 SLC15A4Q8N697 577 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 SNX31Q8N9S9 440 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 TMEM52Q8NDY8 209 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 SLC22A8Q8TCC7 542 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 KRT12Q99456 494 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 FOXC2Q99958 501 aa13.16□□□□□ -0.3
COMMD4-211ENST00000564815 DERL2Q9GZP9 239 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms