RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ZNF256Q9Y2P7 627 aaPredicted RBP3.52□□□□□ -1.85
UBR1-205ENST00000564540 ILVBLA1L0T0 632 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 TMCO5BA8MYB1 307 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 H7C0S8 307 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 CTDSPLO15194 276 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 ST8SIA3O43173 380 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 KBTBD11O94819 623 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 RLN1P04808 185 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 GJB2P29033 226 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 ID1P41134 155 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 NPBWR1P48145 328 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 PPIAP62937 165 aaKnown RBP3.51□□□□□ -1.85
UBR1-205ENST00000564540 TIMM50Q3ZCQ8 353 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 VWA2Q5GFL6 755 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 LYPLAL1Q5VWZ2 237 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 TMEM64Q6YI46 380 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 CACUL1Q86Y37 369 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 CCDC71Q8IV32 467 aaPredicted RBP3.51□□□□□ -1.85
UBR1-205ENST00000564540 NAXDQ8IW45 347 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 ZNF781Q8N8C0 355 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 C8orf46Q8TAG6 207 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 ATG101Q9BSB4 218 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 LSG1Q9H089 658 aaKnown RBP3.51□□□□□ -1.85
UBR1-205ENST00000564540 S100A14Q9HCY8 104 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 MED17Q9NVC6 651 aa3.51□□□□□ -1.85
UBR1-205ENST00000564540 PFASO15067 1338 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 TRAV9-2A0A087WT02 112 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 BCLAF3A2AJT9 711 aaKnown RBP3.5□□□□□ -1.85
UBR1-205ENST00000564540 SRPX2O60687 465 aaPredicted RBP3.5□□□□□ -1.85
UBR1-205ENST00000564540 GRAP2O75791 330 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 LYNP07948 512 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 GIG44P09565 113 aaPredicted RBP3.5□□□□□ -1.85
UBR1-205ENST00000564540 TSPY3P0CV98 308 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 TSPY8P0CW00 308 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 IST1P53990 364 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 KCTD2Q14681 263 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 LTB4RQ15722 352 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 DNASE1L2Q92874 299 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 ZIM3Q96PE6 472 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 YTHDF1Q9BYJ9 559 aaKnown RBP3.5□□□□□ -1.85
UBR1-205ENST00000564540 TRIM7Q9C029 511 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 ZNF665Q9H7R5 613 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 MRPL17Q9NRX2 175 aaKnown RBP3.5□□□□□ -1.85
UBR1-205ENST00000564540 GIMAP2Q9UG22 337 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 SLC6A5Q9Y345 797 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 ETV7Q9Y603 341 aa3.5□□□□□ -1.85
UBR1-205ENST00000564540 KIAA1217Q5T5P2 1943 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 TRAV34A0A0B4J273 112 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 FOXI3A8MTJ6 420 aaPredicted RBP3.49□□□□□ -1.85
UBR1-205ENST00000564540 NEDD8-MDP1E9PL57 170 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 HAT1O14929 419 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 CLN5O75503 358 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 SIX3O95343 332 aaPredicted RBP3.49□□□□□ -1.85
UBR1-205ENST00000564540 LY6G6DO95868 133 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 PIGRP01833 764 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 OR9G9P0C7N8 305 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 UMPSP11172 480 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 ZNF19P17023 458 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 GP5P40197 560 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 KCNJ1P48048 391 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 RPL34P49207 117 aaKnown RBP3.49□□□□□ -1.85
UBR1-205ENST00000564540 LYZP61626 148 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 UTF1Q5T230 341 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 MARC1Q5VT66 337 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 ZNF730Q6ZMV8 503 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 C4orf19Q8IY42 314 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 UXS1Q8NBZ7 420 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 RNF149Q8NC42 400 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 FLVCR1-AS1Q8TAF5 88 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 ERP27Q96DN0 273 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 GBP5Q96PP8 586 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 ERGIC2Q96RQ1 377 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 VIPAS39Q9H9C1 493 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 ZNF319Q9P2F9 582 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 ITGA11Q9UKX5 1188 aa3.49□□□□□ -1.85
UBR1-205ENST00000564540 TDRD6O60522 2096 aaKnown RBP3.48□□□□□ -1.85
UBR1-205ENST00000564540 YDJCA8MPS7 323 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 KBTBD13C9JR72 458 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 FHP07954 510 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 SKILP12757 684 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 PRG2P13727 222 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 FHITP49789 147 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 NAAAQ02083 359 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 TFCP2Q12800 502 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 TWISTNBQ3B726 338 aaPredicted RBP3.48□□□□□ -1.85
UBR1-205ENST00000564540 REP15Q6BDI9 236 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 SIGLEC15Q6ZMC9 328 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
UBR1-205ENST00000564540 THNSL1Q8IYQ7 743 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 CLEC1AQ8NC01 280 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 GTSF1Q8WW33 167 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 BADQ92934 168 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 MCCC1Q96RQ3 725 aaPredicted RBP3.48□□□□□ -1.85
UBR1-205ENST00000564540 ZNF446Q9NWS9 450 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 GTF3C4Q9UKN8 822 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 GPR132Q9UNW8 380 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 POMT1Q9Y6A1 747 aa3.48□□□□□ -1.85
UBR1-205ENST00000564540 E2F3O00716 465 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 LRRTM2O43300 516 aa3.47□□□□□ -1.85
UBR1-205ENST00000564540 SUPT20HL2P0C7V6 817 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms