RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TUSC1Q2TAM9 212 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 HSP90AA4PQ58FG1 418 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 SLC22A10Q63ZE4 541 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 OR2A2Q6IF42 318 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 SLCO4C1Q6ZQN7 724 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 CREBRFQ8IUR6 639 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 GRAMD2AQ8IUY3 354 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 ZNF398Q8TD17 642 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 SGCDQ92629 289 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 TMEM186Q96B77 213 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 C1orf147Q96MC9 270 aaPredicted RBP9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 OR2A5Q96R48 311 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 SYT11Q9BT88 431 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 UBQLN3Q9H347 655 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 VPS37BQ9H9H4 285 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 CWC15Q9P013 229 aaKnown RBP9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 WHRNQ9P202 907 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 CAPN11Q9UMQ6 739 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 IKBKGQ9Y6K9 419 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 LOC105371242A0A075B767 164 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 TCRBV16S1A1N1A0A5B0 115 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 SHISA9B4DS77 424 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 H0Y3Z8 333 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 EIF3FO00303 357 aaPredicted RBP9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 WWP2O00308 870 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 EMC8O43402 210 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 LIASO43766 372 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 RAMP1O60894 148 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 TRAPPC6AO75865 159 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 ACTL6AO96019 429 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 OPN1MWP04001 364 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 HLA-DQB2P05538 268 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 OPN1MW2P0DN77 364 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 OPN1MW3P0DN78 364 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 RALBP11234 206 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 ATP1B2P14415 290 aaPredicted RBP9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 ZNF165P49910 485 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 GPR143P51810 404 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 CDH11P55287 796 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 HLXQ14774 488 aaPredicted RBP9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 TERF2Q15554 542 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 CYP1B1Q16678 543 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 DPCR1Q3MIW9 517 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 OPN5Q6U736 354 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 KIR3DL3Q8N743 410 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 MLKLQ8NB16 471 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 RERGQ96A58 199 aaPredicted RBP9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 KCTD12Q96CX2 325 aaKnown RBP9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 DCUN1D1Q96GG9 259 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 PEX11GQ96HA9 241 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 COL21A1Q96P44 957 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 IL17FQ96PD4 163 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 B9D2Q9BPU9 175 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 MYOZ1Q9NP98 299 aaPredicted RBP9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 NGBQ9NPG2 151 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 ETNK2Q9NVF9 386 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 RBM22Q9NW64 420 aaKnown RBP eCLIP9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 UBP1Q9NZI7 540 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 U3KQK5 164 aa9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 DMBT1Q9UGM3 2413 aaPredicted RBP9.5□□□□□ -0.89
HDGFL3-204ENST00000563790 K7EIL1 84 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 SGK494L7N484 410 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 ACSL3O95573 720 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 CYP1A2P05177 515 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 GSTM1P09488 218 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 OMGP23515 440 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 ZNF135P52742 658 aaPredicted RBP9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 NAGLUP54802 743 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 KRTAP10-3P60369 221 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 GSTM4Q03013 218 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 GRB7Q14451 532 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 C2orf68Q2NKX9 166 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 PPP6R3Q5H9R7 873 aaPredicted RBP9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 TMCO3Q6UWJ1 677 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 RBMS3Q6XE24 437 aaKnown RBP9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 C1QL2Q7Z5L3 287 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 ATG4DQ86TL0 474 aaPredicted RBP9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 LRRC49Q8IUZ0 686 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 OR2A1Q8NGT9 310 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 PAQR8Q8TEZ7 354 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 GATAD1Q8WUU5 269 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 JSRP1Q96MG2 331 aaPredicted RBP9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 PTCHD1Q96NR3 888 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 MCEEQ96PE7 176 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 DPH7Q9BTV6 452 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 VPS16Q9H269 839 aa9.49□□□□□ -0.89
HDGFL3-204ENST00000563790 IGKV3D-11A0A0A0MRZ8 115 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 GOLGA6L10A0A0M3HER8 536 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 GOLGA6L10A6NI86 522 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 A8MUA0 341 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 GOLGA6L19H0YKK7 550 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 LIN7AO14910 233 aaPredicted RBP9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 GPC4O75487 556 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 AVPP01185 164 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 FHP07954 510 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 IL1RNP18510 177 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 ARL4AP40617 200 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 HK2P52789 917 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 SIRPAP78324 504 aa9.48□□□□□ -0.89
HDGFL3-204ENST00000563790 HYAL2Q12891 473 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms