RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 VAPAQ9P0L0 249 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 C6orf203Q9P0P8 240 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-202ENST00000563366 EPHA6Q9UF33 1036 aa9.22□□□□□ -0.93
UBFD1-202ENST00000563366 A0A0A6YYD5 115 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 A0A1B0GVT2 93 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 C1orf226A1L170 272 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 TMEM221A6NGB7 291 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 FAM220BPB1ANY3 271 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 M0R296 226 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 ARPC2O15144 300 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 RGS9O75916 674 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PDGFBP01127 241 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 GPIP06744 558 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 FAM58BPP0C7Q3 252 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 UMPSP11172 480 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 LAMP1P11279 417 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PIM1P11309 404 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 ANPEPP15144 967 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 CDH3P22223 829 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PSMA4P25789 261 aaKnown RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 GCKP35557 465 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 BUD31P41223 144 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 GPR3P46089 330 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 ST13P50502 369 aaKnown RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PLA2G16P53816 162 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 MAZP56270 477 aaKnown RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 MTPNP58546 118 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 DEFB133Q30KQ1 61 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 TSSK4Q6SA08 328 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 CEP68Q76N32 757 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 SERPINA11Q86U17 422 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 SAMD14Q8IZD0 417 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 ZFP28Q8NHY6 868 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 NUDT8Q8WV74 236 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 TM4SF19Q96DZ7 209 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 ZBED6CLQ96FA7 236 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 DUS3LQ96G46 650 aaKnown RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 ZDHHC12Q96GR4 267 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 SLC45A3Q96JT2 553 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 OR2A5Q96R48 311 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 CCDC3Q9BQI4 270 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 CPPED1Q9BRF8 314 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-202ENST00000563366 CHRNA10Q9GZZ6 450 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 ZSCAN32Q9NX65 697 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 TAS2R9Q9NYW1 312 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 TAS2R7Q9NYW3 318 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 SLAMF8Q9P0V8 285 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PHF11Q9UIL8 331 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PILRBQ9UKJ0 227 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PILRAQ9UKJ1 303 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PSME2Q9UL46 239 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 PCDHB14Q9Y5E9 798 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 SPACA6W5XKT8 324 aa9.21□□□□□ -0.94
UBFD1-202ENST00000563366 A0A1W2PRB8 838 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 TCRBV3S1A0A5B6 114 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 ELOVL7A1L3X0 281 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 TLCD2A6NGC4 264 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 CLIC1O00299 241 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 GSTA4O15217 222 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PPM1DO15297 605 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PDPK1O15530 556 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 DUX1O43812 170 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 SRPX2O60687 465 aaPredicted RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 SCN2BO60939 215 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 SORBS2O94875 1100 aaKnown RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 KRT75O95678 551 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 GBAP04062 536 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 ABCB1P08183 1280 aaPredicted RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 FCGR1AP12314 374 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 GLB1P16278 677 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 HOXB9P17482 250 aaPredicted RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 ATP5A1P25705 553 aaKnown RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PTPN6P29350 595 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 SLC7A1P30825 629 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 NTSP30990 170 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 VHLP40337 213 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 MAGEA8P43361 318 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PPM1FP49593 454 aaPredicted RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 WNT3P56703 355 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PHC1P78364 1004 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 MRPS22P82650 360 aaKnown RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PLIN5Q00G26 463 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 MS4A2Q01362 244 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 FADDQ13158 208 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 MLC1Q15049 377 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 CYP51A1Q16850 503 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PLK5Q496M5 336 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 FCRL6Q6DN72 434 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 ZCCHC8Q6NZY4 707 aaKnown RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 LRRC74BQ6ZQY2 392 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 ZNF621Q6ZSS3 439 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 VN1R4Q7Z5H5 301 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 TRIM73Q86UV7 250 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 ANKRD46Q86W74 232 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 IFNEQ86WN2 208 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 TICAM1Q8IUC6 712 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 ACOT4Q8N9L9 421 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 C19orf47Q8N9M1 422 aaKnown RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 FAM47BQ8NA70 645 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 DTWD2Q8NBA8 298 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms