RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CLCA3PQ9Y6N3 262 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 BLACEA4D250 179 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 PRRT4C9JH25 899 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 TMX2-CTNND1H3BSU7 103 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 SAP18O00422 153 aaKnown RBP7.24□□□□□ -1.25
TCF4-216ENST00000562680 THRBP10828 461 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 ARNTP27540 789 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 AHRP35869 848 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 RPS9P46781 194 aaKnown RBP7.24□□□□□ -1.25
TCF4-216ENST00000562680 TPTEP56180 551 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 NRG3P56975 720 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 RAB8AP61006 207 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 GPNMBQ14956 572 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 NRF1Q16656 503 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 ZSWIM7Q19AV6 140 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 Q3ZCU0 254 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 ARMCX4Q5H9R4 360 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 ARHGAP40Q5TG30 622 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 ATG14Q6ZNE5 492 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 TREML1Q86YW5 311 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 ZNF527Q8NB42 609 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 OR9I1Q8NGQ6 314 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 OR2L8Q8NGY9 312 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 HHIPQ96QV1 700 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 C1QTNF1Q9BXJ1 281 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 CLEC4MQ9H2X3 399 aaPredicted RBP7.24□□□□□ -1.25
TCF4-216ENST00000562680 ADAM29Q9UKF5 820 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 CLEC4EQ9ULY5 219 aa7.24□□□□□ -1.25
TCF4-216ENST00000562680 A0A0J9YY10 115 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 FAM86C2PA6NEL3 165 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 TRIM24O15164 1050 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ICMTO60725 284 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 TYRP1P17643 537 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ALOX12P18054 663 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 CCR10P46092 362 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ACY1Q03154 408 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 PDK3Q15120 406 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ZFP69Q49AA0 526 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 CMPK2Q5EBM0 449 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 METTL25Q8N6Q8 603 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 OR5K2Q8NHB8 316 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 LILRB4Q8NHJ6 448 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 BBS10Q8TAM1 723 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 PIGXQ8TBF5 258 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 PMEPA1Q969W9 287 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 BIRC8Q96P09 236 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 GTPBP2Q9BX10 602 aaKnown RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 SAV1Q9H4B6 383 aaPredicted RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 LRRC42Q9Y546 428 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 CCDC182A6NF36 153 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 MYL12BO14950 172 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 SNPHO15079 494 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 PSIP1O75475 530 aaKnown RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 VNN2O95498 520 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 IGFBP5P24593 272 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ITGB8P26012 769 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 CD27P26842 260 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 IDH2P48735 452 aaKnown RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 GRB7Q14451 532 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 LETMD1Q6P1Q0 360 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 RPS27LQ71UM5 84 aaKnown RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 OR5AR1Q8NGP9 310 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 S100ZQ8WXG8 99 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 COQ10AQ96MF6 247 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 WDR83Q9BRX9 315 aaKnown RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 BTN3A3O00478 584 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 GJB3O75712 270 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 SERPINA1P01009 418 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 XRCC1P18887 633 aaPredicted RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 AQP1P29972 269 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 L3MBTL4Q8NA19 623 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 GPR151Q8TDV0 419 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ZNF480Q8WV37 535 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 GAL3ST3Q96A11 431 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 SIT1Q9Y3P8 196 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 PCDHB3Q9Y5E6 796 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 LRRC14BA6NHZ5 514 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 H0YIV9 168 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ARNTLO00327 626 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 FOXE1O00358 373 aaPredicted RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 CCNB2O95067 398 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 SNAP29O95721 258 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 EGFP01133 1207 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 HSD17B1P14061 328 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 IL12BP29460 328 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 OPRD1P41143 372 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 CBX5P45973 191 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 RACK1P63244 317 aaKnown RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 CTBSQ01459 385 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 RHAGQ02094 409 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 EFR3AQ14156 821 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 KHDC1Q4VXA5 237 aaKnown RBP7.23□□□□□ -1.25
TCF4-216ENST00000562680 CATSPEREQ5SY80 951 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 REEP3Q6NUK4 255 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 TMEM150AQ86TG1 271 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ESX1Q8N693 406 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 ALG14Q96F25 216 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 C1QTNF2Q9BXJ5 285 aa7.23□□□□□ -1.25
TCF4-216ENST00000562680 A0A0G2JN53 185 aa7.22□□□□□ -1.25
TCF4-216ENST00000562680 SCAMP2O15127 329 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms