RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 OR51B5Q9H339 312 aa23.57■■□□□ 1.36
NME3-202ENST00000561637 CDC42EP4Q9H3Q1 356 aaKnown RBP23.57■■□□□ 1.36
NME3-202ENST00000561637 PRM3Q9NNZ6 103 aa23.57■■□□□ 1.36
NME3-202ENST00000561637 CHST11Q9NPF2 352 aa23.57■■□□□ 1.36
NME3-202ENST00000561637 CACNA1CQ13936 2221 aa23.57■■□□□ 1.36
NME3-202ENST00000561637 A0A087X1B8 175 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 SLC25A12O75746 678 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 CD46P15529 392 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 ATP5A1P25705 553 aaKnown RBP23.56■■□□□ 1.36
NME3-202ENST00000561637 EEF1DP29692 281 aaKnown RBP23.56■■□□□ 1.36
NME3-202ENST00000561637 HSD17B7P56937 341 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 LAPTM5Q13571 262 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 SETDB1Q15047 1291 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 PFKFB4Q16877 469 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 FAM219BQ5XKK7 198 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 SLC25A25Q6KCM7 469 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 MED27Q6P2C8 311 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 ZNF321PQ8N8H1 164 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 UHMK1Q8TAS1 419 aaKnown RBP23.56■■□□□ 1.36
NME3-202ENST00000561637 IFT81Q8WYA0 676 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 SUCOQ9UBS9 1254 aaKnown RBP23.56■■□□□ 1.36
NME3-202ENST00000561637 FBXW2Q9UKT8 454 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 PCDHGB6Q9Y5F9 930 aa23.56■■□□□ 1.36
NME3-202ENST00000561637 ASPDHA6ND91 283 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 NPIPA5E9PKD4 350 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 LDB3O75112 727 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 SIX3O95343 332 aaPredicted RBP23.55■■□□□ 1.36
NME3-202ENST00000561637 MAPKAPK3Q16644 382 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 HIST2H2ACQ16777 129 aaPredicted RBP23.55■■□□□ 1.36
NME3-202ENST00000561637 HIST2H2AA3Q6FI13 130 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 ZNF595Q8IYB9 648 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 ACOT4Q8N9L9 421 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 KCNC2Q96PR1 638 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 VPS11Q9H270 941 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 CPSF2Q9P2I0 782 aaKnown RBP23.55■■□□□ 1.36
NME3-202ENST00000561637 NPIPA1Q9UND3 350 aa23.55■■□□□ 1.36
NME3-202ENST00000561637 A0A088AWK7 358 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 TMEM200CA6NKL6 621 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 NME2P1O60361 137 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 GFAPP14136 432 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 ZNF10P21506 573 aaPredicted RBP23.54■■□□□ 1.36
NME3-202ENST00000561637 NME2P22392 152 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 RFC3P40938 356 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 SERPINB8P50452 374 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 HSF1Q00613 529 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 KRTAP21-3Q3LHN1 58 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 GRHL2Q6ISB3 625 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 MYLK4Q86YV6 388 aaPredicted RBP23.54■■□□□ 1.36
NME3-202ENST00000561637 SIAH3Q8IW03 269 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 CPSF7Q8N684 471 aaKnown RBP23.54■■□□□ 1.36
NME3-202ENST00000561637 HUS1BQ8NHY5 278 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 RHEBL1Q8TAI7 183 aa23.54■■□□□ 1.36
NME3-202ENST00000561637 PPIEQ9UNP9 301 aaKnown RBP23.54■■□□□ 1.36
NME3-202ENST00000561637 C19orf84I3L1E1 186 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 CLDN4O14493 209 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 KLK8O60259 260 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 PRKRAO75569 313 aaKnown RBP23.53■■□□□ 1.36
NME3-202ENST00000561637 KLHL2O95198 593 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 MYBL2P10244 700 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 EPB42P16452 691 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 TYK2P29597 1187 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 TRHRP34981 398 aaPredicted RBP23.53■■□□□ 1.36
NME3-202ENST00000561637 CA7P43166 264 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 CYB561P49447 251 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 HLCSP50747 726 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 CLCN2P51788 898 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 ALDH6A1Q02252 535 aaKnown RBP23.53■■□□□ 1.36
NME3-202ENST00000561637 PCDH1Q08174 1060 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 C3AR1Q16581 482 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 FAM83EQ2M2I3 478 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 TECRLQ5HYJ1 363 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 GOLGA7Q7Z5G4 137 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 ARMC10Q8N2F6 343 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 TMEM178AQ8NBL3 297 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 ADAMTS18Q8TE60 1221 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 PTPMT1Q8WUK0 201 aaPredicted RBP23.53■■□□□ 1.36
NME3-202ENST00000561637 SLC44A1Q8WWI5 657 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 VMP1Q96GC9 406 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 MTERF1Q99551 399 aaKnown RBP23.53■■□□□ 1.36
NME3-202ENST00000561637 ADAP2Q9NPF8 381 aa23.53■■□□□ 1.36
NME3-202ENST00000561637 CTNSO60931 367 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 IFNA16P05015 189 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 HIST1H1TP22492 207 aaPredicted RBP23.52■■□□□ 1.36
NME3-202ENST00000561637 SSR2P43308 183 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 PIK3CGP48736 1102 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 ACAP2Q15057 778 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 TERF2Q15554 542 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 KHDRBS2Q5VWX1 349 aaKnown RBP23.52■■□□□ 1.36
NME3-202ENST00000561637 RELL1Q8IUW5 271 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 OR4N5Q8IXE1 308 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 DOK4Q8TEW6 326 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 ANKRD9Q96BM1 317 aaPredicted RBP23.52■■□□□ 1.36
NME3-202ENST00000561637 GPR137Q96N19 417 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 TBCDQ9BTW9 1192 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 FUT8Q9BYC5 575 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 ALOXE3Q9BYJ1 711 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 TRIM45Q9H8W5 580 aaPredicted RBP23.52■■□□□ 1.36
NME3-202ENST00000561637 LYRM4Q9HD34 91 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 DMRT3Q9NQL9 472 aa23.52■■□□□ 1.36
NME3-202ENST00000561637 MTRF1LQ9UGC7 380 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms