RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 REXO4Q9GZR2 422 aaKnown RBP13.1□□□□□ -0.31
PRKXP1-201ENST00000561423 DDX47Q9H0S4 455 aaKnown RBP13.1□□□□□ -0.31
PRKXP1-201ENST00000561423 IL1RL2Q9HB29 575 aa13.1□□□□□ -0.31
PRKXP1-201ENST00000561423 Q9UFV3 132 aa13.1□□□□□ -0.31
PRKXP1-201ENST00000561423 CLCA3PQ9Y6N3 262 aa13.1□□□□□ -0.31
PRKXP1-201ENST00000561423 DNHD1Q96M86 4753 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 A0A088AWK7 358 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 GOLGA6L10A0A0M3HER8 536 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 NCF1BA6NI72 391 aaPredicted RBP13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 NCF1CA8MVU1 366 aaPredicted RBP13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 AQP7O14520 342 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 CTNSO60931 367 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 CCL3P10147 92 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 CD99P14209 185 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 NCF1P14598 390 aaPredicted RBP13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 ZNF10P21506 573 aaPredicted RBP13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 GSTM2P28161 218 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 ZFP36L2P47974 494 aaKnown RBP13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 HCFC1P51610 2035 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 MTTPP55157 894 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 RNF4P78317 190 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 FBXO48Q5FWF7 155 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 TRIM40Q6P9F5 258 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 FRA10AC1Q70Z53 315 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 ADAMTSL2Q86TH1 951 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 KRT78Q8N1N4 520 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 GOLM1Q8NBJ4 401 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 OR14A16Q8NHC5 309 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 DAZLQ92904 295 aaKnown RBP13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 CXXC4Q9H2H0 198 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 NT5DC2Q9H857 520 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 SEMA4BQ9NPR2 832 aaPredicted RBP13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 TUBA8Q9NY65 449 aaPredicted RBP13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 CTNNAL1Q9UBT7 734 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 VTI1BQ9UEU0 232 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 ATG4BQ9Y4P1 393 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 TEX264Q9Y6I9 313 aa13.09□□□□□ -0.31
PRKXP1-201ENST00000561423 ZNF469Q96JG9 3925 aaPredicted RBP13.08□□□□□ -0.31
PRKXP1-201ENST00000561423 ATP6AP2A0A1C7CYW4 349 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 SYNDIG1LA6NDD5 238 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 ANKDD1BA6NHY2 528 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 TAPBPO15533 448 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 LDB3O75112 727 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 CTAG2O75638 210 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 ATP6AP2O75787 350 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 CD22P20273 847 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 ID2Q02363 134 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 STX4Q12846 297 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 SNTB1Q13884 538 aaKnown RBP13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 ZNF793Q6ZN11 406 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 PDIK1LQ8N165 341 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 OR8K3Q8NH51 312 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 SLC2A12Q8TD20 617 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 SLCO2A1Q92959 643 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 CAPZA3Q96KX2 299 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 F2RL3Q96RI0 385 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 FOXC2Q99958 501 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 CNPPD1Q9BV87 410 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 LIME1Q9H400 295 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 COPS7BQ9H9Q2 264 aaPredicted RBP13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 SLC24A3Q9HC58 644 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 PRDM7Q9NQW5 492 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 SACM1LQ9NTJ5 587 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 CCM2LQ9NUG4 571 aaPredicted RBP13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 ZNF358Q9NW07 568 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 DNAJB12Q9NXW2 375 aaKnown RBP13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 GPRC5BQ9NZH0 403 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 SPRR3Q9UBC9 169 aa13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 ZNF490Q9ULM2 529 aaPredicted RBP13.08□□□□□ -0.32
PRKXP1-201ENST00000561423 SPG11Q96JI7 2443 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 C17orf105B2RV13 164 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 WDR1O75083 606 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 ETHE1O95571 254 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 HOXB4P17483 251 aaPredicted RBP13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 PIGAP37287 484 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 MAN2A2P49641 1150 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 FOLH1Q04609 750 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 MGAT5Q09328 741 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 FRG1Q14331 258 aaKnown RBP13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 EFTUD2Q15029 972 aaKnown RBP eCLIP13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 TGFBIQ15582 683 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 C1orf185Q5T7R7 199 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 ADGRD1Q6QNK2 874 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 OPN5Q6U736 354 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 UBE3DQ7Z6J8 389 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 TGIF2LYQ8IUE0 185 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 ZZZ3Q8IYH5 903 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 SLC35F6Q8N357 371 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 SPATA6LQ8N4H0 392 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 ZNF721Q8TF20 911 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 NINJ1Q92982 152 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 ESAMQ96AP7 390 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 SGCZQ96LD1 299 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 MAPKAP1Q9BPZ7 522 aa13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 PITHD1Q9GZP4 211 aaPredicted RBP13.07□□□□□ -0.32
PRKXP1-201ENST00000561423 DNAJC11Q9NVH1 559 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms