RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 GBP7Q8N8V2 638 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 KDM1BQ8NB78 822 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 ACBD4Q8NC06 268 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 ZMIZ2Q8NF64 920 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 GOT1L1Q8NHS2 421 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 CCL4L1Q8NHW4 92 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 FIBINQ8TAL6 211 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 STT3BQ8TCJ2 826 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 C1orf54Q8WWF1 131 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 RXFP2Q8WXD0 754 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 IRGQQ8WZA9 623 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 NPIPB3Q92617 1050 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CENPIQ92674 756 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 SARAFQ96BY9 339 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TLCD1Q96CP7 247 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 REPS1Q96D71 796 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 EID2BQ96D98 161 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CNDP1Q96KN2 507 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 LMLNQ96KR4 655 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 PPP1R2P1Q96PQ5 205 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 RNF157Q96PX1 679 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 FYTTD1Q96QD9 318 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 CPXM1Q96SM3 734 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SECISBP2Q96T21 854 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 TREX2Q9BQ50 279 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 ZNF670Q9BS34 389 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TRIM51Q9BSJ1 452 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 NAT9Q9BTE0 207 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 MECRQ9BV79 373 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 HEMGNQ9BXL5 484 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 DUSP16Q9BY84 665 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SMYD3Q9H7B4 428 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 ZWILCHQ9H900 591 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 LRTM1Q9HBL6 345 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 LRRC4Q9HBW1 653 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 DMAP1Q9NPF5 467 aaPredicted RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 LHX9Q9NQ69 397 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 DYRK4Q9NR20 520 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 MBNL1Q9NR56 388 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 INTS9Q9NV88 658 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 ARHGEF38Q9NXL2 777 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 ASIC5Q9NY37 505 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 NKIRAS1Q9NYS0 192 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 PAK5Q9P286 719 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 LGALS13Q9UHV8 139 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TSPAN16Q9UKR8 245 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 DAPP1Q9UN19 280 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 SCML2Q9UQR0 700 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 FARSAQ9Y285 508 aaKnown RBP3.07□□□□□ -1.92
SPG11-225ENST00000561391 IKBKGQ9Y6K9 419 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 TRPM6Q9BX84 2022 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 AKAP6Q13023 2319 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 CNTRLQ7Z7A1 2325 aa3.07□□□□□ -1.92
SPG11-225ENST00000561391 VPS13CQ709C8 3753 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 IGHV1OR21-1A0A087WYE8 117 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 EXOC1LA0A1B0GW35 172 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 C5orf60A6NFR6 353 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TRIM64A6NGJ6 449 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ERICH4A6NGS2 130 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 TRIM64BA6NI03 449 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 C3orf70A6NLC5 250 aaPredicted RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 C21orf140B9A014 251 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 DNALI1O14645 258 aaPredicted RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 PSMD3O43242 534 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CTAG2O75638 210 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ALPPP05187 535 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CTSLP07711 333 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 FAM200BP0CF97 657 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 DHRS4L1P0CG22 281 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 MLNP12872 115 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CCDC130P13994 396 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ALDH3A1P30838 453 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 HPDP32754 393 aaPredicted RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 STX2P32856 288 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 GARSP41250 739 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 MAGEA6P43360 314 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 MMP13P45452 471 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 KCNJ1P48048 391 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 VPS41P49754 854 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 AGTR2P50052 363 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 PNLIPRP1P54315 467 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 PRKAA2P54646 552 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ELLP55199 621 aaPredicted RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 CDH6P55285 790 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 GEMIN4P57678 1058 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 KRTAP10-6P60371 365 aaPredicted RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 MAGOHP61326 146 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 YPEL5P62699 121 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SLC25A11Q02978 314 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 FOXO1Q12778 655 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 SF3A3Q12874 501 aaKnown RBP eCLIP3.06□□□□□ -1.92
SPG11-225ENST00000561391 KEAP1Q14145 624 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 DPYSL3Q14195 570 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 ITIH4Q14624 930 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 PDK1Q15118 436 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 OASLQ15646 514 aaKnown RBP3.06□□□□□ -1.92
SPG11-225ENST00000561391 DLG2Q15700 870 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CNGA3Q16281 694 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 DPYSL2Q16555 572 aa3.06□□□□□ -1.92
SPG11-225ENST00000561391 CLPPQ16740 277 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms