RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 ABHD17BQ5VST6 288 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 ZNF385CQ66K41 422 aaPredicted RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 JMJD6Q6NYC1 403 aaPredicted RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 CLNKQ7Z7G1 428 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 MRGPREQ86SM8 312 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 ZC3H7AQ8IWR0 971 aaKnown RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 ZADH2Q8N4Q0 377 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 SLC5A8Q8N695 610 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 HORMAD2Q8N7B1 307 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 AMER3Q8N944 861 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 VPS37AQ8NEZ2 397 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 OR5L2Q8NGL0 311 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 EXTL1Q92935 676 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 SMIM10Q96HG1 83 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 THOC3Q96J01 351 aaKnown RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 KCNA7Q96RP8 456 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 UBL7Q96S82 380 aaPredicted RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 HBEGFQ99075 208 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 MAPKAP1Q9BPZ7 522 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 LHPPQ9H008 270 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 ADNPQ9H2P0 1102 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 ZNF160Q9HCG1 818 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 FARSBQ9NSD9 589 aaKnown RBP10.09□□□□□ -0.79
TPM1-229ENST00000561242 ATAD3AQ9NVI7 634 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 GPR83Q9NYM4 423 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 PCDHGB4Q9UN71 923 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 ZNF451Q9Y4E5 1061 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 PIKFYVEQ9Y2I7 2098 aa10.09□□□□□ -0.79
TPM1-229ENST00000561242 SERTM1A2A2V5 107 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 FAM227AF5H4B4 570 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 FCHO1O14526 889 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 PRAMEF4O60810 478 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 PEX11AO75192 247 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 KLF7O75840 302 aaPredicted RBP10.08□□□□□ -0.8
TPM1-229ENST00000561242 B3GALT4O96024 378 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 CHRNGP07510 517 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 TROVE2P10155 538 aaKnown RBP eCLIP10.08□□□□□ -0.8
TPM1-229ENST00000561242 PRPS2P11908 318 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 CSNK2A2P19784 350 aaPredicted RBP10.08□□□□□ -0.8
TPM1-229ENST00000561242 NT5EP21589 574 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 HPCAL1P37235 193 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 ETV4P43268 484 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 STX1BP61266 288 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 TNFRSF17Q02223 184 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 ZNF763Q0D2J5 394 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 HYAL2Q12891 473 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 TBR1Q16650 682 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 TNFAIP8L3Q5GJ75 292 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 DCAF10Q5QP82 559 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 NDUFAF5Q5TEU4 345 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 PRAMEF9Q5VWM5 478 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 PAPD4Q6PIY7 484 aaKnown RBP10.08□□□□□ -0.8
TPM1-229ENST00000561242 RIPOR1Q6ZS17 1223 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 COX15Q7KZN9 410 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 TRIM46Q7Z4K8 759 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 PDSS2Q86YH6 399 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 HPS6Q86YV9 775 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 TMEM151BQ8IW70 566 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 GALNT16Q8N428 558 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 RNF175Q8N4F7 328 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 NATD1Q8N6N6 113 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 TEX19Q8NA77 164 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 ZFP28Q8NHY6 868 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 C9orf43Q8TAL5 461 aaPredicted RBP10.08□□□□□ -0.8
TPM1-229ENST00000561242 CHTF18Q8WVB6 975 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 ZNF75CPQ92670 426 aaPredicted RBP10.08□□□□□ -0.8
TPM1-229ENST00000561242 KLHL29Q96CT2 875 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 C19orf60Q96EN9 201 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 ZNF354BQ96LW1 612 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 SPSB2Q99619 263 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 DEFB126Q9BYW3 111 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 ACPTQ9BZG2 426 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 PRORYQ9H606 182 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 SLC22A11Q9NSA0 550 aa10.08□□□□□ -0.8
TPM1-229ENST00000561242 ZFC3H1O60293 1989 aaKnown RBP10.08□□□□□ -0.8
TPM1-229ENST00000561242 CNOT1A5YKK6 2376 aaKnown RBP10.08□□□□□ -0.8
TPM1-229ENST00000561242 KNTC1P50748 2209 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 GOLGA8QA0A0J9YX86 632 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 GOLGA8OA6NCC3 632 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 GOLGA8NF8WBI6 632 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 PIP5K1BO14986 540 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 PROM1O43490 865 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 DPM1O60762 260 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 JRKO75564 520 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 BCAS2O75934 225 aaPredicted RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 SEC24DO94855 1032 aaPredicted RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 GPR75O95800 540 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 CAPNS1P04632 268 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 VIMP08670 466 aaKnown RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 PORP16435 677 aaPredicted RBP10.07□□□□□ -0.8
TPM1-229ENST00000561242 LBPP18428 481 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 MAOAP21397 527 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 TIA1P31483 386 aaKnown RBP eCLIP10.07□□□□□ -0.8
TPM1-229ENST00000561242 GPC1P35052 558 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 BSGP35613 385 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 GCGRP47871 477 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 CLCN2P51788 898 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 XKP51811 444 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 POLE2P56282 527 aa10.07□□□□□ -0.8
TPM1-229ENST00000561242 RPL38P63173 70 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms