RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 IGHV1-45A0A0A0MS14 117 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 TCRBV16S1A1N1A0A5B0 115 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 FAM227AF5H4B4 570 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 PSMD12O00232 456 aaPredicted RBP9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 PEX12O00623 359 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 TMPRSS11DO60235 418 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 PRMT3O60678 531 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 GUCY1B2O75343 617 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 CRCPO75575 148 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 RSL1D1O76021 490 aaKnown RBP9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 CHEK2O96017 543 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 HPP00738 406 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 KLK1P06870 262 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 C8orf89P0DMQ9 161 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 PRKAR1AP10644 381 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 NEFHP12036 1026 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 BGNP21810 368 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 RRADP55042 308 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 PPP2R2AP63151 447 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 BTG2P78543 158 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 IGLV3-21P80748 117 aaPredicted RBP9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 HMGCS1Q01581 520 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 TNFRSF17Q02223 184 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 BST1Q10588 318 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 ATP1A4Q13733 1029 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 TBR1Q16650 682 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 DEFB109BQ30KR1 87 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 LINC00303Q3SY05 128 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 XKR7Q5GH72 579 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 SH2D4BQ5SQS7 431 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 FAM219BQ5XKK7 198 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 ATG16L1Q676U5 607 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 SHISA6Q6ZSJ9 500 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 NDUFAF7Q7L592 441 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 ANKRD37Q7Z713 158 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 C1orf52Q8N6N3 182 aaKnown RBP9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 LSM14AQ8ND56 463 aaKnown RBP9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 TMEM52Q8NDY8 209 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 PPP1R14CQ8TAE6 165 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 METTL21AQ8WXB1 218 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 FCRL1Q96LA6 429 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 IMMP1LQ96LU5 166 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 HBEGFQ99075 208 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 SHCBP1LQ9BZQ2 653 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 ILKAPQ9H0C8 392 aaPredicted RBP9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 MANSC1Q9H8J5 431 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 MLXIPLQ9NP71 852 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 THAP1Q9NVV9 213 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 C19orf25Q9UFG5 118 aaPredicted RBP9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 MCM8Q9UJA3 840 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 TUBD1Q9UJT1 453 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 MAN2B2Q9Y2E5 1009 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 WBP11Q9Y2W2 641 aaKnown RBP9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 ATG4BQ9Y4P1 393 aa9.05□□□□□ -0.96
RABGGTA-221ENST00000561055 EML6Q6ZMW3 1958 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 A0A1W2PR48 441 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 OR2W5A6NFC9 320 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ERVH48-1M5A8F1 160 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 RGS14O43566 566 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 B4GALT2O60909 372 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 LYPLA1O75608 230 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 CEACAM4O75871 244 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 HSPA4LO95757 839 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 COX6A1P12074 109 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ICAM2P13598 275 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ACPPP15309 386 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 CPN2P22792 545 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 TLX1P31314 330 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 TIA1P31483 386 aaKnown RBP eCLIP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 BUD31P41223 144 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 RPL14P50914 215 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 HNRNPFP52597 415 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 RAE1P78406 368 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 OCRLQ01968 901 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ACSM2AQ08AH3 577 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 AIMP2Q13155 320 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 PCOLCEQ15113 449 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 TERF2Q15554 542 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 NSDHLQ15738 373 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 MINDY4Q4G0A6 757 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 DCAF10Q5QP82 559 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 CCNYL2Q5T2Q4 361 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ACSM2BQ68CK6 577 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 CYP20A1Q6UW02 462 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 SCIMPQ6UWF3 145 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 CPEB2Q7Z5Q1 589 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 PRSS58Q8IYP2 241 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 LRRC34Q8IZ02 419 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 OR2T11Q8NH01 316 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 TWIST2Q8WVJ9 160 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ZNF75CPQ92670 426 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 TANKQ92844 425 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 ANKRD9Q96BM1 317 aaPredicted RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 TM4SF18Q96CE8 201 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 APIPQ96GX9 242 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 PTCHD1Q96NR3 888 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 CSF3RQ99062 836 aa9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 PAIP2Q9BPZ3 127 aaKnown RBP9.04□□□□□ -0.96
RABGGTA-221ENST00000561055 WDR77Q9BQA1 342 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms