RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ARMC10Q8N2F6 343 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 LIX1Q8N485 282 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 OR56A3Q8NH54 315 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 DAZLQ92904 295 aaKnown RBP9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 GAL3ST3Q96A11 431 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 FBXL8Q96CD0 374 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 JSRP1Q96MG2 331 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 SERPINB12Q96P63 405 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 SMR3AQ99954 134 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 SARGQ9BW04 601 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 PELI2Q9HAT8 420 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 IL1RL2Q9HB29 575 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 PPANQ9NQ55 473 aaKnown RBP9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 HOMER3Q9NSC5 361 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 TUBA8Q9NY65 449 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 ABCA2Q9BZC7 2435 aa9.72□□□□□ -0.85
CDC42BPB-207ENST00000560492 MPDZO75970 2070 aa9.71□□□□□ -0.85
CDC42BPB-207ENST00000560492 CTAGE15A4D2H0 777 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 C4orf51C9J302 202 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 IGHG3P01860 377 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 RAF1P04049 648 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 SERPINA6P08185 405 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 MLNP12872 115 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 FOSL1P15407 271 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 TACR1P25103 407 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 CXCR5P32302 372 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 HK2P52789 917 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 PLA2G16P53816 162 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 CDKN2DP55273 166 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 HSD17B7P56937 341 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 RAB38P57729 211 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 KCNJ2P63252 427 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 ELAVL1Q15717 326 aaKnown RBP9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 RTL6Q6ICC9 239 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 OPN5Q6U736 354 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 NXPE4Q6UWF7 544 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 PAMR1Q6UXH9 720 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 CLEC9AQ6UXN8 241 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 FRA10AC1Q70Z53 315 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 CAMKMTQ7Z624 323 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 CTAGE6Q86UF2 777 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 SCYL1Q96KG9 808 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 CAPZA3Q96KX2 299 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 COPS7AQ9UBW8 275 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 MTRF1LQ9UGC7 380 aaKnown RBP9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 SLC22A14Q9Y267 594 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 KCNE2Q9Y6J6 123 aa9.71□□□□□ -0.86
CDC42BPB-207ENST00000560492 HRNRQ86YZ3 2850 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 NINQ8N4C6 2090 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 ANKDD1BA6NHY2 528 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 HSPB2A8KAH6 182 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 C17orf105B2RV13 164 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 TGFBR3LH3BV60 316 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 CLGNO14967 610 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 SUSD5O60279 629 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 GLSO94925 669 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 WDR47O94967 919 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 CCL3P10147 92 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 CERS1P27544 350 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 PIGAP37287 484 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 TRPC1P48995 793 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 ASCL1P50553 236 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 HNRNPFP52597 415 aaKnown RBP9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 PGGT1BP53609 377 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 RUNX2Q13950 521 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 RCN2Q14257 317 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 HSPB2Q16082 182 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 DEFB113Q30KQ7 82 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 RIPPLY2Q5TAB7 128 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 PRAMEF20Q5VT98 475 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 TRIM40Q6P9F5 258 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 SCUBE1Q8IWY4 988 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 ZNF595Q8IYB9 648 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 KLHDC8AQ8IYD2 350 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 GOLM1Q8NBJ4 401 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 C2CD4AQ8NCU7 369 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 LRRN4CLQ8ND94 238 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 TMEM52Q8NDY8 209 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 FAM13CQ8NE31 585 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 WFDC11Q8NEX6 87 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 OR14A16Q8NHC5 309 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 FAM222BQ8WU58 562 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 C18orf12Q96KH6 178 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 YIPF4Q9BSR8 244 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 ALOXE3Q9BYJ1 711 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 SLC6A15Q9H2J7 730 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 ZNF395Q9H8N7 513 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 NEUROD4Q9HD90 331 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 CBLCQ9ULV8 474 aa9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 BOKQ9UMX3 212 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.7□□□□□ -0.86
CDC42BPB-207ENST00000560492 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPB-207ENST00000560492 C15orf38-AP3S2A0A0A6YYH1 394 aa9.69□□□□□ -0.86
CDC42BPB-207ENST00000560492 A0A1B0GVC2 190 aa9.69□□□□□ -0.86
CDC42BPB-207ENST00000560492 SYNDIG1LA6NDD5 238 aa9.69□□□□□ -0.86
CDC42BPB-207ENST00000560492 TUBAL3A6NHL2 446 aa9.69□□□□□ -0.86
CDC42BPB-207ENST00000560492 EEF1E1-BLOC1S5C9J1V9 151 aa9.69□□□□□ -0.86
CDC42BPB-207ENST00000560492 EEF1E1O43324 174 aaKnown RBP9.69□□□□□ -0.86
CDC42BPB-207ENST00000560492 HCN1O60741 890 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms