RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ZSCAN5DPP0CG00 497 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 CCND1P24385 295 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 PIGAP37287 484 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 SCTRP47872 440 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 AGFG1P52594 562 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 HNRNPFP52597 415 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 CATSPEREQ5SY80 951 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 KIAA0930Q6ICG6 404 aaPredicted RBP11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 NEPROQ6NW34 567 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 ADGRD1Q6QNK2 874 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 HSDL2Q6YN16 418 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 TMEM52Q8NDY8 209 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 CD200R1Q8TD46 325 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 KCNJ9Q92806 393 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 OR4K3Q96R72 315 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 GPR21Q99679 349 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 EPB41L4BQ9H329 900 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 ADAP2Q9NPF8 381 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 EIF2B3Q9NR50 452 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 INTS10Q9NVR2 710 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 JKAMPQ9P055 326 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 SOX13Q9UN79 622 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 ZNF148Q9UQR1 794 aa11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-213ENST00000560127 AHRRA9YTQ3 701 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 CLDN4O14493 209 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 IL2RAP01589 272 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 FGGP02679 453 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 AHRP35869 848 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 CBLBQ13191 982 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 CTBP1Q13363 440 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 BMPR2Q13873 1038 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 RUNX2Q13950 521 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 LACC1Q8IV20 430 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 C17orf53Q8N3J3 647 aaPredicted RBP11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 RASGEF1CQ8N431 466 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 ZNF321PQ8N8H1 164 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 ANKRD53Q8N9V6 530 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 NEIL3Q8TAT5 605 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 SMPDL3BQ92485 455 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 PYCR2Q96C36 320 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 SNF8Q96H20 258 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 MS4A14Q96JA4 679 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 DACH2Q96NX9 599 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 HAUS8Q9BT25 410 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 PARVBQ9HBI1 364 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 SH2D2AQ9NP31 389 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 ACKR4Q9NPB9 350 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 PRTFDC1Q9NRG1 225 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 PAK5Q9P286 719 aa11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
RABGGTA-213ENST00000560127 LRRC3CA6NJW4 275 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 NRDCO43847 1150 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 RPL22P35268 128 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 TRPC1P48995 793 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 HSD17B7P56937 341 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 RNF4P78317 190 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 SNX1Q13596 522 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 ELAVL1Q15717 326 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 PHKG1Q16816 387 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 ZNF470Q6ECI4 717 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 TTC27Q6P3X3 843 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 OPN5Q6U736 354 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 CLNKQ7Z7G1 428 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 DENND6AQ8IWF6 608 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 LRRC25Q8N386 305 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 TMEM132CQ8N3T6 1108 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 OR56A3Q8NH54 315 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 PIGTQ969N2 578 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 WDR83Q9BRX9 315 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 PROK2Q9HC23 129 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 ZFP64Q9NPA5 681 aa11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 FBXO6Q9NRD1 293 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-213ENST00000560127 CTAGE9A4FU28 777 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 SH3D21A4FU49 640 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 MBD3L4A6NDZ8 208 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 URADA6NGE7 173 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 MBD3L5A6NJ08 208 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 EEF1E1-BLOC1S5C9J1V9 151 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 EIF3FO00303 357 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 EEF1E1O43324 174 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 C8GP07360 202 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 BMP7P18075 431 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 CTSSP25774 331 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 KCNJ1P48048 391 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 BTN3A2P78410 334 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 REEP5Q00765 189 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 DHX9Q08211 1270 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 CRYZQ08257 329 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 SLC13A2Q13183 592 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 BBS9Q3SYG4 887 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 TOR1AIP1Q5JTV8 583 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 NSUN5P2Q63ZY6 315 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 DRICH1Q6PGQ1 229 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 LIX1Q8N485 282 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 TBC1D19Q8N5T2 526 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 CCDC89Q8N998 374 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 OR8K3Q8NH51 312 aa11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 PTPMT1Q8WUK0 201 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-213ENST00000560127 NEIL2Q969S2 332 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms