RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 SFXN5Q8TD22 340 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 TRUB1Q8WWH5 349 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 MYDGFQ969H8 173 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 MAL2Q969L2 176 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 MOAP1Q96BY2 351 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 YIPF6Q96EC8 236 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 SCARF2Q96GP6 870 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 C12orf66Q96MD2 445 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 FERD3LQ96RJ6 166 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 INSM2Q96T92 566 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 MAPKAP1Q9BPZ7 522 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 FAIM2Q9BWQ8 316 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 LGR4Q9BXB1 951 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF556Q9HAH1 456 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PREBQ9HCU5 417 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 SIRT3Q9NTG7 399 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 TBC1D23Q9NUY8 699 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 TMEM184CQ9NVA4 438 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 FKBP14Q9NWM8 211 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 ERVK-18Q9QC07 812 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 KCND3Q9UK17 655 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PLAGL1Q9UM63 463 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 SCML1Q9UN30 329 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 ZFR2Q9UPR6 939 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 B3GNT3Q9Y2A9 372 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 SLC17A4Q9Y2C5 497 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 FAM32AQ9Y421 112 aaKnown RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 TESMINQ9Y4I5 508 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 MAP4K5Q9Y4K4 846 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PCDHGA6Q9Y5G7 932 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PCDHGA2Q9Y5H1 932 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 PCYT1BQ9Y5K3 369 aaPredicted RBP7.7□□□□□ -1.18
SMAD3-212ENST00000559937 NINQ8N4C6 2090 aa7.7□□□□□ -1.18
SMAD3-212ENST00000559937 A0A0A6YYD5 115 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 A0A0J9YVX5 310 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 TMEM247A6NEH6 219 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 C5orf58C9J3I9 102 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 MPZL2O60487 215 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 WBP4O75554 376 aaKnown RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CCNB2O95067 398 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 GADD45GO95257 159 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 OPN1SWP03999 348 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CYP4B1P13584 511 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CD247P20963 164 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CBLP22681 906 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 HTR1BP28222 390 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 AQP1P29972 269 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 GRK3P35626 688 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 AHRP35869 848 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 KRT20P35900 424 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 SERPINB10P48595 397 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 MASP1P48740 699 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ENTPD1P49961 510 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ST13P50502 369 aaKnown RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 MANFP55145 182 aaKnown RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 SMIM11AP58511 58 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 KIAA1024LP59773 190 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 SGCGQ13326 291 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 LAPTM4AQ15012 233 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 TBCEQ15813 527 aaPredicted RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ZIC1Q15915 447 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CTF1Q16619 201 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 EXOC3L2Q2M3D2 409 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 IER5LQ5T953 404 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 PRAMEF8Q5VWM4 474 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 PRAMEF7Q5VXH5 474 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 LAIR1Q6GTX8 287 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 OR4C11Q6IEV9 310 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ANKRD54Q6NXT1 300 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 TMEM64Q6YI46 380 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 LINC00471Q8N535 108 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 SLC5A8Q8N695 610 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 HORMAD2Q8N7B1 307 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF513Q8N8E2 541 aaPredicted RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 LMNTD1Q8N9Z9 388 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 LINC01555Q8NAE3 123 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF540Q8NDQ6 660 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 SRFBP1Q8NEF9 429 aaKnown RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 OR2A1Q8NGT9 310 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 RHOXF1Q8NHV9 184 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 C9orf43Q8TAL5 461 aaPredicted RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 FNDC8Q8TC99 324 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CREB3L4Q8TEY5 395 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 APOBEC4Q8WW27 367 aaKnown RBP7.69□□□□□ -1.18
SMAD3-212ENST00000559937 SGCDQ92629 289 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 TANKQ92844 425 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CHFRQ96EP1 664 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 VMP1Q96GC9 406 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 DHRS1Q96LJ7 313 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 F2RL3Q96RI0 385 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ZNF607Q96SK3 696 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CSF3RQ99062 836 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 FEVQ99581 238 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ACAT2Q9BWD1 397 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 CCDC90BQ9GZT6 254 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 BTBD1Q9H0C5 482 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 OCEL1Q9H607 264 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ANKHQ9HCJ1 492 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 ACOT13Q9NPJ3 140 aa7.69□□□□□ -1.18
SMAD3-212ENST00000559937 LHX9Q9NQ69 397 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms