RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 C9orf106Q8NAJ2 232 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 TMEM52Q8NDY8 209 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 FAM13CQ8NE31 585 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 UTP15Q8TED0 518 aaKnown RBP8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 ZC3HAV1LQ96H79 300 aaKnown RBP8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 RUNDC3BQ96NL0 473 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 PANX2Q96RD6 677 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 TIMP4Q99727 224 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 OR8D2Q9GZM6 311 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 KLHL31Q9H511 634 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 PRTFDC1Q9NRG1 225 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 BOKQ9UMX3 212 aaPredicted RBP8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 SLC6A5Q9Y345 797 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 SONP18583 2426 aaKnown RBP8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 CR1P17927 2039 aa8.22□□□□□ -1.09
SNRPA1-208ENST00000559686 FREM3P0C091 2139 aa8.21□□□□□ -1.09
SNRPA1-208ENST00000559686 LRRC3CA6NJW4 275 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 DEFB108AA8MXU0 73 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 C4orf51C9J302 202 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 VAPBO95292 243 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 ACSL3O95573 720 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 SAT1P21673 171 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 HRH2P25021 359 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 ATP5J2P56134 94 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 CCZ1BP86790 482 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 CCZ1P86791 482 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 CRYZQ08257 329 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 NAE1Q13564 534 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 CAPRIN1Q14444 709 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 IQCB1Q15051 598 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 TCEAL1Q15170 157 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 PHKG1Q16816 387 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 HYAL4Q2M3T9 481 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 TOR1AIP1Q5JTV8 583 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 WIPI1Q5MNZ9 446 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 NSUN5P2Q63ZY6 315 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 OPN5Q6U736 354 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 PIWIL4Q7Z3Z4 852 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 SDCCAG8Q86SQ7 713 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 PRUNE1Q86TP1 453 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 GCNT2Q8N0V5 402 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 RASGEF1CQ8N431 466 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 GOLM1Q8NBJ4 401 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 OR8K1Q8NGG5 319 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 GIMAP7Q8NHV1 300 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 LPGAT1Q92604 370 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 CCDC42Q96M95 316 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 WFIKKN1Q96NZ8 548 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 GSX2Q9BZM3 304 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 NHEJ1Q9H9Q4 299 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 ETNK1Q9HBU6 452 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 ZFP64Q9NPA5 681 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 ZNHIT6Q9NWK9 470 aaKnown RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 JKAMPQ9P055 326 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 IFNKQ9P0W0 207 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 RIMKLBQ9ULI2 386 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 TESMINQ9Y4I5 508 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 CLCA3PQ9Y6N3 262 aa8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 RAI1Q7Z5J4 1906 aaPredicted RBP8.21□□□□□ -1.1
SNRPA1-208ENST00000559686 CTIFO43310 598 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 TJP3O95049 919 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 ESR1P03372 595 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 ETS1P14921 441 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 TNNI3P19429 210 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 CCR8P51685 355 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 RNF4P78317 190 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 BTN3A2P78410 334 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 ASPHQ12797 758 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 PWP1Q13610 501 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 CLEC12BQ2HXU8 276 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 TTLL9Q3SXZ7 439 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 DCST1Q5T197 706 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 SLC22A10Q63ZE4 541 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 AGTRAPQ6RW13 159 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 C20orf204Q6ZNR8 217 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 PLEKHM3Q6ZWE6 761 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 ZNF550Q7Z398 422 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 TMEM132CQ8N3T6 1108 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 ZNF441Q8N8Z8 693 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 GPATCH11Q8N954 259 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 TMEM171Q8WVE6 324 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 SLC44A1Q8WWI5 657 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 ASB11Q8WXH4 323 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 PYCR2Q96C36 320 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 INTS12Q96CB8 462 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 SGCZQ96LD1 299 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 TSNARE1Q96NA8 513 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 BPIFA3Q9BQP9 254 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 MED18Q9BUE0 208 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 SPNS1Q9H2V7 528 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 SH2D2AQ9NP31 389 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 ADAP2Q9NPF8 381 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 RAB6BQ9NRW1 208 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 MMACHCQ9Y4U1 282 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 PCDHGB3Q9Y5G1 929 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 DOCK7Q96N67 2140 aa8.2□□□□□ -1.1
SNRPA1-208ENST00000559686 MBD3L3A6NE82 208 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 FAM181BA6NEQ2 426 aa8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 A8MV72 311 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-208ENST00000559686 H3BMM5 538 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms