RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TGFBIQ15582 683 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 NDUFAF5Q5TEU4 345 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 ABHD17CQ6PCB6 329 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 HSDL2Q6YN16 418 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 GK5Q6ZS86 529 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 CLNKQ7Z7G1 428 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 SLC22A16Q86VW1 577 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 CCDC71Q8IV32 467 aaPredicted RBP12.14□□□□□ -0.47
TPM1-220ENST00000559556 GOLM1Q8NBJ4 401 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 OR5M3Q8NGP4 307 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 OR8K3Q8NH51 312 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 PTPMT1Q8WUK0 201 aaPredicted RBP12.14□□□□□ -0.47
TPM1-220ENST00000559556 PWWP2AQ96N64 755 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 FAM173AQ9BQD7 235 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 TMEM79Q9BSE2 394 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 CAPS2Q9BXY5 557 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 DERL2Q9GZP9 239 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 RHOJQ9H4E5 214 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 COPS7BQ9H9Q2 264 aaPredicted RBP12.14□□□□□ -0.47
TPM1-220ENST00000559556 PNPLA3Q9NST1 481 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 MOCS1Q9NZB8 636 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 LIPGQ9Y5X9 500 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 DSCAMO60469 2012 aa12.14□□□□□ -0.47
TPM1-220ENST00000559556 A0A1B0GVC2 190 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 FIGNL2A6NMB9 653 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 NPIPA3F8WFD2 350 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 WWP2O00308 870 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 BCKDKO14874 412 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 TP73O15350 636 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 KLK8O60259 260 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 PRAMEF4O60810 478 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 CTNSO60931 367 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 KRT38O76015 456 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 BMPR2Q13873 1038 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 EFTUD2Q15029 972 aaKnown RBP eCLIP12.13□□□□□ -0.471e-5■■■□□ 16.7
TPM1-220ENST00000559556 HYAL4Q2M3T9 481 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 GXYLT1Q4G148 440 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 CDKL4Q5MAI5 379 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 PRAMEF9Q5VWM5 478 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 ADNP2Q6IQ32 1131 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 RTL4Q6ZR62 310 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 SYDE1Q6ZW31 735 aaPredicted RBP12.13□□□□□ -0.47
TPM1-220ENST00000559556 ANKMY2Q8IV38 441 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 TCAIMQ8N3R3 496 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 FAM109AQ8N4B1 249 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 WDR34Q96EX3 536 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 VPS39Q96JC1 886 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 SCYL1Q96KG9 808 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 CAPZA3Q96KX2 299 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 SMC6Q96SB8 1091 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 ZNF559Q9BR84 538 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 ALOXE3Q9BYJ1 711 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 CNOT10Q9H9A5 744 aaKnown RBP12.13□□□□□ -0.47
TPM1-220ENST00000559556 SLC24A3Q9HC58 644 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 LYRM4Q9HD34 91 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 DNAJC11Q9NVH1 559 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 NSMCE4AQ9NXX6 385 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 FAM215AQ9Y5M1 114 aa12.13□□□□□ -0.47
TPM1-220ENST00000559556 ROS1P08922 2347 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 NCF1BA6NI72 391 aaPredicted RBP12.12□□□□□ -0.47
TPM1-220ENST00000559556 NCF1CA8MVU1 366 aaPredicted RBP12.12□□□□□ -0.47
TPM1-220ENST00000559556 E7ESA3 106 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 AQP7O14520 342 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 TAPBPO15533 448 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 SUSD5O60279 629 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 SEC31AO94979 1220 aaKnown RBP12.12□□□□□ -0.47
TPM1-220ENST00000559556 IFNA16P05015 189 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 NCF1P14598 390 aaPredicted RBP12.12□□□□□ -0.47
TPM1-220ENST00000559556 CD22P20273 847 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 CNR1P21554 472 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 MAGEA5P43359 124 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 KCNC1P48547 511 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 ARL4CP56559 192 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 RNF4P78317 190 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 TGM3Q08188 693 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 FOXO1Q12778 655 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 ILF2Q12905 390 aaKnown RBP12.12□□□□□ -0.47
TPM1-220ENST00000559556 SERTAD2Q14140 314 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 FASTKD3Q14CZ7 662 aaKnown RBP12.12□□□□□ -0.47
TPM1-220ENST00000559556 KRTAP21-3Q3LHN1 58 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 CES4AQ5XG92 561 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 RTL6Q6ICC9 239 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 TRILQ7L0X0 811 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 TMEM200AQ86VY9 491 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 TMEM251Q8N6I4 163 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 ZNF321PQ8N8H1 164 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 OR5M9Q8NGP3 310 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 SLC2A12Q8TD20 617 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 KIAA1191Q96A73 305 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 PTCD3Q96EY7 689 aaKnown RBP12.12□□□□□ -0.47
TPM1-220ENST00000559556 SGCZQ96LD1 299 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 KCNC2Q96PR1 638 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 TTYH2Q9BSA4 534 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 IL1RL2Q9HB29 575 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 PRDM7Q9NQW5 492 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 IGSF5Q9NSI5 407 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 SACM1LQ9NTJ5 587 aa12.12□□□□□ -0.47
TPM1-220ENST00000559556 WWOXQ9NZC7 414 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms