RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 OR8J2Q8NGG1 315 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 OR8K5Q8NH50 307 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 WDR36Q8NI36 951 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 DNAJB14Q8TBM8 379 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 ZNF717Q9BY31 904 aaPredicted RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 KLHL31Q9H511 634 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 AHSPQ9NZD4 102 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 STX18Q9P2W9 335 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 RARRES3Q9UL19 164 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 SATB2Q9UPW6 733 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 H0Y3Z8 333 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 SAP18O00422 153 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 TXNDC9O14530 226 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 PLD2O14939 933 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 SCAMP2O15127 329 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 ZSCAN9O15535 394 aaPredicted RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 AKAP10O43572 662 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 SCN2BO60939 215 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 ERN1O75460 977 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 SMIM10L1P0DMW3 83 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 HOXB9P17482 250 aaPredicted RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 KIR3DL1P43629 444 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 WNT3P56703 355 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 RGS1Q08116 209 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 ZNF763Q0D2J5 394 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 FLOT2Q14254 428 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 LRIF1Q5T3J3 769 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 TMEM214Q6NUQ4 689 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 TLDC1Q6P9B6 456 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 GPR180Q86V85 440 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 PPP1R3BQ86XI6 285 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 ZNF655Q8N720 491 aaPredicted RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 OR8J3Q8NGG0 315 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 PMEPA1Q969W9 287 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 COQ8BQ96D53 544 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 SMIM10Q96HG1 83 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 CTRCQ99895 268 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 PAIP1Q9H074 479 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 S100A14Q9HCY8 104 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 SLC39A1Q9NY26 324 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 ATP6V1HQ9UI12 483 aa15.67■□□□□ 0.1
TPM1-219ENST00000559397 EXO1Q9UQ84 846 aaKnown RBP15.67■□□□□ 0.1
TPM1-219ENST00000559397 CROCCQ5TZA2 2017 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 A0A096LPI6 279 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 C4orf51C9J302 202 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 PLPP1O14494 284 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 POLR1CO15160 346 aaPredicted RBP15.66■□□□□ 0.1
TPM1-219ENST00000559397 MED26O95402 600 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 TIAF1O95411 115 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 PTPN6P29350 595 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 BSGP35613 385 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 EMP3P54852 163 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 RAB15P59190 212 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 GRM7Q14831 915 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 PGS1Q32NB8 556 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 RABL3Q5HYI8 236 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 C3orf38Q5JPI3 329 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 C6orf10Q5SRN2 563 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 PRAMEF17Q5VTA0 474 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 MSRB3Q8IXL7 192 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 GPR135Q8IZ08 494 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 OR7A2PQ8NGA2 310 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 C16orf78Q8WTQ4 265 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 GFM2Q969S9 779 aaKnown RBP15.66■□□□□ 0.1
TPM1-219ENST00000559397 MS4A6EQ96DS6 147 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 ITCHQ96J02 903 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 C10orf90Q96M02 699 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 ANKRD27Q96NW4 1050 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 F2RL3Q96RI0 385 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 NLNQ9BYT8 704 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 REXO4Q9GZR2 422 aaKnown RBP15.66■□□□□ 0.1
TPM1-219ENST00000559397 RMND5AQ9H871 391 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 PRM3Q9NNZ6 103 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 MYNNQ9NPC7 610 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 IRAK4Q9NWZ3 460 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 VAPAQ9P0L0 249 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 GMPR2Q9P2T1 348 aaKnown RBP15.66■□□□□ 0.1
TPM1-219ENST00000559397 PISDQ9UG56 409 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 L3MBTL1Q9Y468 752 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 PCDHGA8Q9Y5G5 932 aa15.66■□□□□ 0.1
TPM1-219ENST00000559397 GNG14A0A1W2PPG7 69 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 HYKKA2RU49 373 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 GABRR3A8MPY1 467 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 KLK1P06870 262 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 JMJD7P0C870 316 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 COX7A2P14406 83 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 TCN1P20061 433 aaPredicted RBP15.65■□□□□ 0.1
TPM1-219ENST00000559397 TPP2P29144 1249 aaPredicted RBP15.65■□□□□ 0.1
TPM1-219ENST00000559397 HPCAL1P37235 193 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 ID4P47928 161 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 GSK3BP49841 420 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 STXBP1P61764 594 aaKnown RBP15.65■□□□□ 0.1
TPM1-219ENST00000559397 BNIP2Q12982 314 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 PDE7AQ13946 482 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 FXNQ16595 210 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.65■□□□□ 0.1
TPM1-219ENST00000559397 TMEM35AQ53FP2 167 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 TOR1AIP1Q5JTV8 583 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 GARNL3Q5VVW2 1013 aa15.65■□□□□ 0.1
TPM1-219ENST00000559397 OR4F3Q6IEY1 312 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms