RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PTK6Q13882 451 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CCNIQ14094 377 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ITIH4Q14624 930 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 PPP1R7Q15435 360 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 KYNUQ16719 465 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 KLHL38Q2WGJ6 581 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 DEFB110Q30KQ9 67 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ZNF750Q32MQ0 723 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 C18orf21Q32NC0 220 aaPredicted RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 TEDDM1Q5T9Z0 273 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ZDHHC20Q5W0Z9 365 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 FBXO42Q6P3S6 717 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CASC4Q6P4E1 433 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 AFTPHQ6ULP2 937 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SUSD1Q6UWL2 747 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 MBOAT1Q6ZNC8 495 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CDHR3Q6ZTQ4 885 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CTAGE6Q86UF2 777 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 IZUMO1Q8IYV9 350 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SPATA6LQ8N4H0 392 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 NOA1Q8NC60 698 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 ZNF248Q8NDW4 579 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SIMC1Q8NDZ2 872 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SPATA4Q8NEY3 305 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 PPHLN1Q8NEY8 458 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 OR1L3Q8NH93 324 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 HM13Q8TCT9 377 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 DENND1AQ8TEH3 1009 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 MAIP1Q8WWC4 291 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 KCNE4Q8WWG9 221 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 LCN9Q8WX39 176 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ULK4Q96C45 1275 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ZNF501Q96CX3 271 aaPredicted RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 LRRC46Q96FV0 321 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CFAP36Q96G28 342 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 TRAPPC9Q96Q05 1148 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 GPR21Q99679 349 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 OLFM1Q99784 485 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CMKLR1Q99788 373 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 EBNA1BP2Q99848 306 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 MACROD1Q9BQ69 325 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 FERMT1Q9BQL6 677 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ALG8Q9BVK2 526 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 STRADBQ9C0K7 418 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 IL22Q9GZX6 179 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 TWSG1Q9GZX9 223 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 KIR3DX1Q9H7L2 352 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 UCK1Q9HA47 277 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 EIF2B3Q9NR50 452 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 FBXO8Q9NRD0 319 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 C20orf96Q9NUD7 363 aaPredicted RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 ABCF3Q9NUQ8 709 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 NCKIPSDQ9NZQ3 722 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SEMA5BQ9P283 1151 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 ASIC3Q9UHC3 531 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 RIMKLBQ9ULI2 386 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 CHMP2BQ9UQN3 213 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SH2B3Q9UQQ2 575 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 TEX264Q9Y6I9 313 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 COL6A6A6NMZ7 2263 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 SMG1Q96Q15 3661 aaKnown RBP4.06□□□□□ -1.76
SPG11-211ENST00000558561 ATMQ13315 3056 aa4.06□□□□□ -1.76
SPG11-211ENST00000558561 MN1Q10571 1320 aaPredicted RBP4.05□□□□□ -1.76
SPG11-211ENST00000558561 LOC105369274A0A096LPK9 316 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 IGKV1-8A0A0C4DH67 115 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 LOC102723532A0A0G2JNH3 316 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 GSAPA4D1B5 854 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 CTAGE9A4FU28 777 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 TMEM8BA6NDV4 472 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 OR2W5A6NFC9 320 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 ARHGEF33A8MVX0 844 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 EFCAB8A8MWE9 144 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 FOXO6A8MYZ6 492 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 B4E171 279 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 GPR89AB7ZAQ6 455 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 H3BMH7 237 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 K7ENP7 123 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 CES2O00748 559 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 PRMT5O14744 637 aaPredicted RBP4.05□□□□□ -1.76
SPG11-211ENST00000558561 POLR1CO15160 346 aaPredicted RBP4.05□□□□□ -1.76
SPG11-211ENST00000558561 RAD1O60671 282 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 CTSVO60911 334 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 KCNJ13O60928 360 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 STK17BO94768 372 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 AP2A2O94973 939 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 C1orf105O95561 183 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 CAPN1P07384 714 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 ITGA2BP08514 1039 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 CHRM5P08912 532 aaPredicted RBP4.05□□□□□ -1.76
SPG11-211ENST00000558561 SLC35G4P0C7Q5 338 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 OR56A5P0C7T3 313 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 GPR89BP0CG08 455 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 RALBP11234 206 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 MLNP12872 115 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 PKMP14618 531 aaKnown RBP4.05□□□□□ -1.76
SPG11-211ENST00000558561 UGT2B7P16662 529 aa4.05□□□□□ -1.76
SPG11-211ENST00000558561 TCP1P17987 556 aaKnown RBP4.05□□□□□ -1.76
SPG11-211ENST00000558561 NR1D1P20393 614 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms