RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 XKR7Q5GH72 579 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 C19orf48Q6RUI8 117 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 PPP1R32Q7Z5V6 425 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 GPR180Q86V85 440 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 KIRREL3Q8IZU9 778 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 ARFGAP2Q8N6H7 521 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 CKAP2Q8WWK9 683 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 TSLPQ969D9 159 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 C19orf60Q96EN9 201 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 PPP1R36Q96LQ0 422 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 C3orf30Q96M34 536 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 MESP1Q9BRJ9 268 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 EBPLQ9BY08 206 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 LRTM1Q9HBL6 345 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 MCM8Q9UJA3 840 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 MRPS33Q9Y291 106 aaKnown RBP16.42■□□□□ 0.22
TPM1-214ENST00000558544 ATG4BQ9Y4P1 393 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 POLR3HQ9Y535 204 aaPredicted RBP16.42■□□□□ 0.22
TPM1-214ENST00000558544 ASB4Q9Y574 426 aa16.42■□□□□ 0.22
TPM1-214ENST00000558544 ATP6AP2A0A1C7CYW4 349 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 CYR61O00622 381 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 LSM1O15116 133 aaKnown RBP16.41■□□□□ 0.22
TPM1-214ENST00000558544 ALOX12BO75342 701 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 PRKRAO75569 313 aaKnown RBP16.41■□□□□ 0.22
TPM1-214ENST00000558544 ATP6AP2O75787 350 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 IGHEP01854 428 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 KITP10721 976 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 MMP11P24347 488 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 TIA1P31483 386 aaKnown RBP eCLIP16.41■□□□□ 0.225e-8■□□□□ 8.7
TPM1-214ENST00000558544 MAPK12P53778 367 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 RPL38P63173 70 aaKnown RBP16.41■□□□□ 0.22
TPM1-214ENST00000558544 GALNTL6Q49A17 601 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 C18orf63Q68DL7 685 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 QSOX2Q6ZRP7 698 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 LANCL3Q6ZV70 420 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 MRGPREQ86SM8 312 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 C8orf44Q96CB5 159 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 MAGEB18Q96M61 343 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 PRTFDC1Q9NRG1 225 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 C1orf109Q9NX04 203 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 TEX10Q9NXF1 929 aaPredicted RBP16.41■□□□□ 0.22
TPM1-214ENST00000558544 MS4A12Q9NXJ0 267 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 GIMAP2Q9UG22 337 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 HS3ST3B1Q9Y662 390 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 ITPR1Q14643 2758 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 MED13Q9UHV7 2174 aa16.41■□□□□ 0.22
TPM1-214ENST00000558544 GNG14A0A1W2PPG7 69 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 NPIPB8E9PQR5 432 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 SOCS6O14544 535 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 PROM1O43490 865 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 PRMT3O60678 531 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 SEC22BO75396 215 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 AIFM1O95831 613 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 C8orf89P0DMQ9 161 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 MAOAP21397 527 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 BUD31P41223 144 aaPredicted RBP16.4■□□□□ 0.22
TPM1-214ENST00000558544 EEF1A2Q05639 463 aaKnown RBP16.4■□□□□ 0.22
TPM1-214ENST00000558544 ATP1A4Q13733 1029 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 MED25Q71SY5 747 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 CLNKQ7Z7G1 428 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 ZNF595Q8IYB9 648 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 METTL21AQ8WXB1 218 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 C11orf24Q96F05 449 aaPredicted RBP16.4■□□□□ 0.22
TPM1-214ENST00000558544 PTCHD1Q96NR3 888 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 NUF2Q9BZD4 464 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 SLCO1B3Q9NPD5 702 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 PRDM9Q9NQV7 894 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 SIRT5Q9NXA8 310 aa16.4■□□□□ 0.22
TPM1-214ENST00000558544 A0A1W2PR48 441 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 MYO1DO94832 1006 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 CYC1P08574 325 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 NR2F6P10588 404 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 SLC13A2Q13183 592 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 KIAA0040Q15053 153 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 NSDHLQ15738 373 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 COL28A1Q2UY09 1125 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 DEFB109BQ30KR1 87 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 ATP6AP1LQ52LC2 224 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 GALNT18Q6P9A2 607 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 TMEM205Q6UW68 189 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 KIRREL2Q6UWL6 708 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 RIPOR1Q6ZS17 1223 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 FAM47EQ6ZV65 393 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 CRLF3Q8IUI8 442 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 PLPP5Q8NEB5 264 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 FAM76AQ8TAV0 307 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 C7orf26Q96N11 449 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 CCT7Q99832 543 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 RPF2Q9H7B2 306 aaKnown RBP16.39■□□□□ 0.21
TPM1-214ENST00000558544 PFDN4Q9NQP4 134 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 NECTIN3Q9NQS3 549 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 RIC8BQ9NVN3 520 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 POLHQ9Y253 713 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 MAN2B2Q9Y2E5 1009 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 MMACHCQ9Y4U1 282 aa16.39■□□□□ 0.21
TPM1-214ENST00000558544 GLOD5A6NK44 160 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 TGFBR3LH3BV60 316 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 CLDN4O14493 209 aa16.38■□□□□ 0.21
TPM1-214ENST00000558544 POLR3GO15318 223 aaPredicted RBP16.38■□□□□ 0.21
TPM1-214ENST00000558544 LDB3O75112 727 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms