RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PIK3CBP42338 1070 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 TDGF1P3P51864 188 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 MLF1P58340 268 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 TAS2R50P59544 299 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 SRSF11Q05519 484 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 SLC13A2Q13183 592 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 TERF2Q15554 542 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 FAM153CQ494X1 144 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF766Q5HY98 468 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF468Q5VIY5 522 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 KHDRBS2Q5VWX1 349 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 METTL2BQ6P1Q9 378 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 CHSY3Q70JA7 882 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 TAOK1Q7L7X3 1001 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 GOLGA7Q7Z5G4 137 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 CLNKQ7Z7G1 428 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ARMC10Q8N2F6 343 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 TMEM151AQ8N4L1 468 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 PTGR2Q8N8N7 351 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ACOT4Q8N9L9 421 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 L3MBTL4Q8NA19 623 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 LRRN4CLQ8ND94 238 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 B3GNT7Q8NFL0 401 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 DNAJB8Q8NHS0 232 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 HUS1BQ8NHY5 278 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 SSC4DQ8WTU2 575 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 NR4A3Q92570 626 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 PHF21BQ96EK2 531 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 MTERF1Q99551 399 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 RHOXF2Q9BQY4 288 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 UTP23Q9BRU9 249 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 SORBS1Q9BX66 1292 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 HES7Q9BYE0 225 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ROGDIQ9GZN7 287 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 EPB41L4BQ9H329 900 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 IPPKQ9H8X2 491 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ACTR8Q9H981 624 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 COPS7BQ9H9Q2 264 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 DMRT3Q9NQL9 472 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 PNO1Q9NRX1 252 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 OLAHQ9NV23 265 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ANKRD10Q9NXR5 420 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ABI3Q9P2A4 366 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 XPR1Q9UBH6 696 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ADGRE2Q9UHX3 823 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF223Q9UK11 482 aaPredicted RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 MRPS33Q9Y291 106 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 RNF11Q9Y3C5 154 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 ANGPTL3Q9Y5C1 460 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 PCDHGB6Q9Y5F9 930 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 TNPO3Q9Y5L0 923 aaKnown RBP8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 IKBKGQ9Y6K9 419 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 NINQ8N4C6 2090 aa8.2□□□□□ -1.1
SNRPA1-206ENST00000558059 MYOCOSA0A1B0GUC4 107 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 EXOC1LA0A1B0GW35 172 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 STX16-NPEPL1H3BU86 382 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 SAP18O00422 153 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 PLPP1O14494 284 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 CDK2AP1O14519 115 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 STX16O14662 325 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 RIPK2O43353 540 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 NEURL1O76050 574 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 RASAL1O95294 804 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 DDAH2O95865 285 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 LDLRP01130 860 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 SNRPAP09012 282 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 MYBL2P10244 700 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 GP1BBP13224 206 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 MST1P26927 711 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TPP2P29144 1249 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 EEF1DP29692 281 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TRHRP34981 398 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 PIK3CGP48736 1102 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 RPS13P62277 151 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 PMP22Q01453 160 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 DDX39BQ13838 428 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 ELOAQ14241 798 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 RCN2Q14257 317 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 OR1C1Q15619 314 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 CPSF6Q16630 551 aaKnown RBP eCLIP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TSNAXIP1Q2TAA8 658 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 AP5B1Q2VPB7 878 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 SPINK14Q6IE38 97 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 OR4C11Q6IEV9 310 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TIFABQ6ZNK6 161 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TRMT10CQ7L0Y3 403 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 ZNF227Q86WZ6 799 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 MYLK4Q86YV6 388 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 OR52B6Q8NGF0 335 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 SUN3Q8TAQ9 357 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 WDR20Q8TBZ3 569 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 NCLNQ969V3 563 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 RGMAQ96B86 450 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 ANKRD9Q96BM1 317 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 TRIM44Q96DX7 344 aaPredicted RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 SCMH1Q96GD3 660 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 SCYL1Q96KG9 808 aa8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 NSUN5Q96P11 429 aaKnown RBP8.19□□□□□ -1.1
SNRPA1-206ENST00000558059 MRPL57Q9BQC6 102 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms