RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 BTN3A2P78410 334 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 BMPR2Q13873 1038 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 OPN5Q6U736 354 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 TMEM139Q8IV31 216 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 FAM47BQ8NA70 645 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 MORN4Q8NDC4 146 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 OR14A16Q8NHC5 309 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 DAZLQ92904 295 aaKnown RBP16.93■□□□□ 0.3
ABCD4-228ENST00000557588 EXO5Q9H790 373 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 NEUROD4Q9HD90 331 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 BEX4Q9NWD9 120 aaPredicted RBP16.93■□□□□ 0.3
ABCD4-228ENST00000557588 ALKBH4Q9NXW9 302 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 MRPS33Q9Y291 106 aaKnown RBP16.93■□□□□ 0.3
ABCD4-228ENST00000557588 NCKAP5O14513 1909 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 NRDCO43847 1150 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 ENO2P09104 434 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-228ENST00000557588 EPXP11678 715 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 CEACAM8P31997 349 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-228ENST00000557588 MAGEA3P43357 314 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 CDKN2DP55273 166 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 RNF4P78317 190 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 RBBP5Q15291 538 aaKnown RBP16.92■□□□□ 0.3
ABCD4-228ENST00000557588 HSP90AA5PQ58FG0 334 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 FBXW10Q5XX13 1052 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 POMZP3Q6PJE2 187 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 ADGRD1Q6QNK2 874 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 NXPE4Q6UWF7 544 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 CHSY3Q70JA7 882 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.92■□□□□ 0.31e-6■□□□□ 8.7
ABCD4-228ENST00000557588 AGGF1Q8N302 714 aaeCLIP16.92■□□□□ 0.3
ABCD4-228ENST00000557588 C2CD4AQ8NCU7 369 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-228ENST00000557588 PTPMT1Q8WUK0 201 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-228ENST00000557588 NUDT8Q8WV74 236 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 FAR2Q96K12 515 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 SERPINB12Q96P63 405 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 BAG1Q99933 345 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-228ENST00000557588 TRIM54Q9BYV2 358 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 SH2D2AQ9NP31 389 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 ZNF629Q9UEG4 869 aaPredicted RBP16.92■□□□□ 0.3
ABCD4-228ENST00000557588 DYRK1BQ9Y463 629 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 MAD1L1Q9Y6D9 718 aa16.92■□□□□ 0.3
ABCD4-228ENST00000557588 TUBAL3A6NHL2 446 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 KIAA1324LA8MWY0 1029 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 HNRNPH1P31943 449 aaKnown RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 VPS41P49754 854 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 SORDQ00796 357 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 GPS1Q13098 491 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 PCBP2Q15366 365 aaKnown RBP eCLIP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 TRIP13Q15645 432 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 ACSF3Q4G176 576 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 RBM20Q5T481 1227 aaKnown RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 SHEQ5VZ18 495 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 MAATS1Q7Z4T9 603 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 CLNKQ7Z7G1 428 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 LRRC25Q8N386 305 aaPredicted RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 ZNF321PQ8N8H1 164 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 MCUQ8NE86 351 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 TNIP2Q8NFZ5 429 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 MAIP1Q8WWC4 291 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 SREK1Q8WXA9 508 aaKnown RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 MS4A6EQ96DS6 147 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 COX4I2Q96KJ9 171 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 QRFPRQ96P65 431 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 ACKR4Q9NPB9 350 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 TRMT1Q9NXH9 659 aaKnown RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 VTI1BQ9UEU0 232 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.91■□□□□ 0.3
ABCD4-228ENST00000557588 TLN2Q9Y4G6 2542 aa16.91■□□□□ 0.3
ABCD4-228ENST00000557588 COL6A5A8TX70 2615 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 A0A088AWK7 358 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 A0A0G2JN53 185 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 LRRC3CA6NJW4 275 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 CYR61O00622 381 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 ERI3O43414 337 aaKnown RBP16.9■□□□□ 0.3
ABCD4-228ENST00000557588 B3GALT2O43825 422 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 GUCA1CO95843 209 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 IFNA16P05015 189 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 CD53P19397 219 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 ZNF10P21506 573 aaPredicted RBP16.9■□□□□ 0.3
ABCD4-228ENST00000557588 SAT1P21673 171 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 GABRB3P28472 473 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 PIGAP37287 484 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 IL2P60568 153 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 SBSNQ6UWP8 590 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 THOC6Q86W42 341 aaKnown RBP16.9■□□□□ 0.3
ABCD4-228ENST00000557588 LACC1Q8IV20 430 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 OR5L2Q8NGL0 311 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 NEIL3Q8TAT5 605 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 SLC2A12Q8TD20 617 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 CSF3RQ99062 836 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 OR8D2Q9GZM6 311 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 SLC6A15Q9H2J7 730 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 IARS2Q9NSE4 1012 aaKnown RBP16.9■□□□□ 0.3
ABCD4-228ENST00000557588 QPCTLQ9NXS2 382 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 BOKQ9UMX3 212 aaPredicted RBP16.9■□□□□ 0.3
ABCD4-228ENST00000557588 MPDZO75970 2070 aa16.9■□□□□ 0.3
ABCD4-228ENST00000557588 LRIT2A6NDA9 550 aa16.89■□□□□ 0.29
ABCD4-228ENST00000557588 CLCA1A8K7I4 914 aa16.89■□□□□ 0.29
ABCD4-228ENST00000557588 CTNSO60931 367 aa16.89■□□□□ 0.29
ABCD4-228ENST00000557588 LY6G6DO95868 133 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms