RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PKP4Q99569 1192 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 LPAR4Q99677 370 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 CHCHD6Q9BRQ6 235 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TP63Q9H3D4 680 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TRIM45Q9H8W5 580 aaPredicted RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ABCF3Q9NUQ8 709 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 OXSMQ9NWU1 459 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 UTP6Q9NYH9 597 aaKnown RBP5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ST6GALNAC2Q9UJ37 374 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 ANAPC5Q9UJX4 755 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 TCAF1Q9Y4C2 921 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 PCDHA3Q9Y5H8 950 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 SNX5Q9Y5X3 404 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 HEATR5BQ9P2D3 2071 aa5.47□□□□□ -1.53
VPS33B-207ENST00000557470 STAB1Q9NY15 2570 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 FAM237BA0A1B0GVD1 139 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF860A6NHJ4 632 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 USP27XA6NNY8 438 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ERI2A8K979 691 aaKnown RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 E7ENX8 843 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 H7BY64 318 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 RGS13O14921 159 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 CD3EAPO15446 510 aaKnown RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 KLK8O60259 260 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 NIPSNAP2O75323 286 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PSIP1O75475 530 aaKnown RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 NDUFS3O75489 264 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 CTAG2O75638 210 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PDE9AO76083 593 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 SLC16A8O95907 504 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TPM1P09493 284 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 FOSL1P15407 271 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TFEBP19484 476 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ATP5DP30049 168 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TRHRP34981 398 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 HLCSP50747 726 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ITGA8P53708 1063 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PNLIPRP1P54315 467 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 DLX5P56178 289 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 RWDD2BP57060 319 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 NUP107P57740 925 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 OR4D2P58180 307 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 MLF1P58340 268 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 GPR85P60893 370 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ADAM8P78325 824 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 CRADDP78560 199 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ABATP80404 500 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TAP2Q03519 686 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 LTBQ06643 244 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ARHGAP19Q14CB8 494 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TMEM177Q53S58 311 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ACSBG2Q5FVE4 666 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 SLC35F1Q5T1Q4 408 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 Q71RC1 249 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 VN1R5Q7Z5H4 357 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 LRRC6Q86X45 466 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 VSTM4Q8IW00 320 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 LRRC56Q8IYG6 542 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 CLYBLQ8N0X4 340 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 MPP5Q8N3R9 675 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF527Q8NB42 609 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 POGLUT1Q8NBL1 392 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PLPP5Q8NEB5 264 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 OR5T3Q8NGG3 340 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 OR52N2Q8NGI0 321 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 SLC35B2Q8TB61 432 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ZCCHC10Q8TBK6 192 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 MCOLN3Q8TDD5 553 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PEX13Q92968 403 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ITFG2Q969R8 447 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TMEM125Q96AQ2 219 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PWWP2AQ96N64 755 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PRAP1Q96NZ9 151 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 BIRC8Q96P09 236 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 ALPK1Q96QP1 1244 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 EBNA1BP2Q99848 306 aaKnown RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 SMR3AQ99954 134 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 GPATCH1Q9BRR8 931 aaKnown RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TMEM120AQ9BXJ8 343 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 POLDIP3Q9BY77 421 aaKnown RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 CHRAC1Q9NRG0 131 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 FAM114A2Q9NRY5 505 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 LANCL2Q9NS86 450 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TREX1Q9NSU2 369 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 NSMCE4AQ9NXX6 385 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 GALPQ9UBC7 116 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 TMCC3Q9ULS5 477 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 RNF112Q9ULX5 631 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PLEKHA6Q9Y2H5 1048 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 KLF13Q9Y2Y9 288 aaPredicted RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 L3MBTL1Q9Y468 752 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 PCDHA13Q9Y5I0 950 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 FN1P02751 2386 aaKnown RBP5.46□□□□□ -1.54
VPS33B-207ENST00000557470 DNAJC13O75165 2243 aa5.46□□□□□ -1.54
VPS33B-207ENST00000557470 KCNE1BA0A087WTH5 132 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 TCRBV7S2A1N4TA0A589 114 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 GOLGA6L9A6NEM1 432 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 ZNF839A8K0R7 811 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 MAGEB17A8MXT2 336 aa5.45□□□□□ -1.54
VPS33B-207ENST00000557470 GOLGA6L6A8MZA4 724 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms