RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 CAMKMTQ7Z624 323 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 SLC22A15Q8IZD6 547 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 CD177Q8N6Q3 437 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 GBP7Q8N8V2 638 aaPredicted RBP3.11□□□□□ -1.91
VRK1-207ENST00000557352 TSACCQ96A04 125 aaPredicted RBP3.11□□□□□ -1.91
VRK1-207ENST00000557352 MUS81Q96NY9 551 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 CCDC106Q9BWC9 280 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 OCR1Q9BZK8 76 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 SDCBP2Q9H190 292 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 RAVER2Q9HCJ3 691 aaKnown RBP3.11□□□□□ -1.91
VRK1-207ENST00000557352 DNAJC4Q9NNZ3 241 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 PIH1D3Q9NQM4 214 aaKnown RBP3.11□□□□□ -1.91
VRK1-207ENST00000557352 TRMT112Q9UI30 125 aaKnown RBP3.11□□□□□ -1.91
VRK1-207ENST00000557352 NIP7Q9Y221 180 aaKnown RBP eCLIP3.11□□□□□ -1.91
VRK1-207ENST00000557352 ZNF256Q9Y2P7 627 aaPredicted RBP3.11□□□□□ -1.91
VRK1-207ENST00000557352 MED23Q9ULK4 1368 aa3.11□□□□□ -1.91
VRK1-207ENST00000557352 A0A087WZ39 114 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 SH3BGRLO75368 114 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 SAP30O75446 220 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 BEST1O76090 585 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 PGM3O95394 542 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 GSRP00390 522 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 ATP5BP06576 529 aaKnown RBP3.1□□□□□ -1.91
VRK1-207ENST00000557352 LDHCP07864 332 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 ZFYP08048 801 aaPredicted RBP3.1□□□□□ -1.91
VRK1-207ENST00000557352 CHMLP26374 656 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 RFC4P35249 363 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 ACTN2P35609 894 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 LIG4P49917 911 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 MFSD4BQ5TF39 518 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 AGAP7PQ5VUJ5 663 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 SUSD4Q5VX71 490 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 CCBE1Q6UXH8 406 aaPredicted RBP3.1□□□□□ -1.91
VRK1-207ENST00000557352 ZBTB49Q6ZSB9 765 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 C15orf52Q6ZUT6 534 aaKnown RBP3.1□□□□□ -1.91
VRK1-207ENST00000557352 CPEB2Q7Z5Q1 589 aaKnown RBP3.1□□□□□ -1.91
VRK1-207ENST00000557352 SNX21Q969T3 373 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 ACTL8Q9H568 366 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 CPSF2Q9P2I0 782 aaKnown RBP3.1□□□□□ -1.91
VRK1-207ENST00000557352 TXNDC16Q9P2K2 825 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 RPS6KA6Q9UK32 745 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 SNX8Q9Y5X2 465 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 ZMYM6O95789 1325 aa3.1□□□□□ -1.91
VRK1-207ENST00000557352 ATAD5Q96QE3 1844 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 IGKV6D-21A0A0A0MT36 114 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 A0A1B0GUL7 405 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 IQCMA0A1B0GVH7 501 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 F8VVB4 439 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 F8VWA3 439 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 PDHXO00330 501 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 RTCAO00442 366 aaKnown RBP3.09□□□□□ -1.91
VRK1-207ENST00000557352 MTRF1O75570 445 aaKnown RBP3.09□□□□□ -1.91
VRK1-207ENST00000557352 RENP00797 406 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 THY1P04216 161 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 HSP90AA1P07900 732 aaKnown RBP3.09□□□□□ -1.91
VRK1-207ENST00000557352 ABCB1P08183 1280 aaPredicted RBP3.09□□□□□ -1.91
VRK1-207ENST00000557352 UQCRFS1P1P0C7P4 283 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 LMO2P25791 158 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 PKLRP30613 574 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 PCGF2P35227 344 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 NT5C2P49902 561 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 CCR3P51677 355 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 LYZP61626 148 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 TFCP2Q12800 502 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 SIX1Q15475 284 aaPredicted RBP3.09□□□□□ -1.91
VRK1-207ENST00000557352 FAM106AQ4KMX7 169 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 FGD3Q5JSP0 725 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 C9orf66Q5T8R8 295 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 Q6ZVH6 145 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 DET1Q7L5Y6 550 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 NBPF5PQ86XG9 351 aaPredicted RBP3.09□□□□□ -1.91
VRK1-207ENST00000557352 TTC30BQ8N4P2 665 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 TC2NQ8N9U0 490 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 RPLP0P6Q8NHW5 317 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 AGAP11Q8TF27 550 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 OTUB1Q96FW1 271 aaPredicted RBP3.09□□□□□ -1.91
VRK1-207ENST00000557352 SERAC1Q96JX3 654 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 NDNQ99608 321 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 MXD3Q9BW11 206 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 KLHL4Q9C0H6 718 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 ANKRD2Q9GZV1 360 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 IL1RAPL2Q9NP60 686 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 ANAPC11Q9NYG5 84 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 NYAP2Q9P242 653 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 IL36AQ9UHA7 158 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 PLCL2Q9UPR0 1127 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 MRPS18CQ9Y3D5 142 aaKnown RBP3.09□□□□□ -1.91
VRK1-207ENST00000557352 NEDD4P46934 1319 aa3.09□□□□□ -1.91
VRK1-207ENST00000557352 RPAP1Q9BWH6 1393 aaPredicted RBP3.09□□□□□ -1.92
VRK1-207ENST00000557352 C10orf71Q711Q0 1435 aa3.09□□□□□ -1.92
VRK1-207ENST00000557352 BAZ2BQ9UIF8 2168 aaKnown RBP3.08□□□□□ -1.92
VRK1-207ENST00000557352 SIPA1L1O43166 1804 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 EDDM13A0A1B0GTR0 161 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 hCG_1809904A0A1W2PP81 198 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 A0A1W2PPE2 198 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 A0A1W2PQ72 361 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 A0A1W2PR64 198 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 RNF103O00237 685 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 CLDN4O14493 209 aa3.08□□□□□ -1.92
VRK1-207ENST00000557352 BBOX1O75936 387 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms